Medicago truncatula (barrel medic): 11445713
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Entry
11445713 CDS
T01716
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
11445713
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
11445713
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
11445713
NCBI-ProteinID:
XP_003607885
UniProt:
Q2MGR5
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Position
4:40685345..40687253
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AA seq
394 aa
AA seq
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MKGLFVLCLIFVIASPCLCQNYFNVVKYGAKGDGHTDDSNAFTNAWQDVCGSTRDTPTLI
IPEGQNFMLQPLSFQGPCKSTTISVKIMGTITAPQSNANWKWDDNDGDYWIKFSNINGLI
INGGGTVDGQGDSWWNNNGHIRPTALKILECDNLKLGPLKHINSPRNHISIVGCNDALIS
NLHIIAPKDSPNTDGIDISTSTNISVQHSIISTGDDCIAINNGTEFIYITDIQCGPGHGI
SVGSLGKDGDYSTVEEIHVSNITFRETTNGARIKTWTGGSGYARKITYEDIIVFKVENPV
IIDQQYDALEPLKTKYNVLEGVSKAVKVSDVIFRNIRGTTNGKDAIDLNCARIGCTNIIL
EDIDIVDLDGKKASASCNSVQGSCSSCNPQVSCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttgtttgttctttgcctaatatttgtcattgcttcaccttgtttgtgccaa
aattacttcaatgttgttaagtatggtgccaaaggcgatggccatacggatgattcaaat
gcttttacgaatgcatggcaagatgtgtgtggttcaactcgagataccccgacacttatc
atacccgaaggccaaaatttcatgttgcaacctttgtcatttcaaggtccttgcaaatct
acaaccattagtgttaagataatgggaactatcactgctccacaaagcaatgcaaattgg
aaatgggacgataatgatggtgattattggatcaagttctcaaacataaatggccttatt
atcaacggtggtggaacagttgatggccaaggtgattcatggtggaacaataatggccat
atcaggccaacggctcttaaaattcttgaatgtgataatctaaaacttggcccattgaaa
cacatcaacagccccagaaatcatataagtatagtcggatgcaatgacgctttaatctct
aatcttcatataattgctccaaaggatagtcccaacaccgatgggattgacatttcaaca
tcaaccaacatctccgttcagcattcaatcatttcaactggtgacgattgcattgccatt
aacaatggtaccgagttcatctacataactgatattcagtgtggacctggtcatggcata
agtgttggaagccttggaaaagatggggattattccacggtagaagagatacatgtgtca
aacatcacctttagagaaacaacaaatggtgctagaatcaagacatggacgggaggatct
gggtatgctagaaagataacatatgaagatattattgtttttaaagtggagaatcctgtg
attattgatcaacagtacgacgctttagaacctctcaaaacaaaatacaatgttttagaa
ggtgtaagcaaagcagtaaaagtgagtgatgttattttccgcaacattcgtggaaccaca
aatggtaaggatgcaattgatctgaattgtgctcgtattggttgcaccaacattatactt
gaagatatcgacatagttgatcttgatggaaagaaagcatctgcatcatgcaatagtgta
caagggtcatgctcttcttgtaatccacaagtatcgtgtctttag
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