Medicago truncatula (barrel medic): 11446020
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Entry
11446020 CDS
T01716
Name
(RefSeq) replication protein A 32 kDa subunit B
KO
K10739
replication factor A2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03030
DNA replication
mtr03420
Nucleotide excision repair
mtr03430
Mismatch repair
mtr03440
Homologous recombination
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
11446020
03420 Nucleotide excision repair
11446020
03430 Mismatch repair
11446020
03440 Homologous recombination
11446020
03460 Fanconi anemia pathway
11446020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
11446020
03400 DNA repair and recombination proteins [BR:
mtr03400
]
11446020
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
11446020
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
11446020
MMR (mismatch excision repair)
11446020
DSBR (double strand breaks repair)
HR (homologous recombination)
11446020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
RPA_C
RMI2
Verrocchio
DUF8786
Motif
Other DBs
NCBI-GeneID:
11446020
NCBI-ProteinID:
XP_003610102
UniProt:
G7JVE0
LinkDB
All DBs
Position
4:complement(61390036..61394272)
Genome browser
AA seq
278 aa
AA seq
DB search
MHANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHALQSSDDRT
GLTIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILNG
MYVRLYGQLKGFQGKTLSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQQH
APNSIQITPTKGYQAQAIPPNQFSGQHNNGQKSVQELVLEYLALPTIRELEGGVFCGTIA
KQLGVSLDNDVIPALDLLSGEGVIYEGLPKHYKICSDG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgaatcagttcgacggcaacgccgccttcgccggcggcggtttcatgccttct
cagaccaatcaaggcggtgaatcctctctcactccctccaagaatcgcgaaagtcaaact
ttgcttccgctgacgatcaagcagatcaaccatgctcttcaatcaagtgatgatagaacc
ggtcttactattgacggtgttggcgttaacaccgttactcttgttggtagggtttgcaac
aaatctggacagattactgaatttaagtttgtacttgacgatggcaccggaacgattgag
tgtactaaatggcttcacgaacctgctgatgcaatggcagtggagagtatcttgaatgga
atgtatgtgcggttatatggacagttgaaaggttttcagggtaaaaccttaagtattttc
tctctcaggcccgttactgacttcaatgagatcgcctcccatttcattgagtgcatttat
gttcatctatacaattcgaggttacagtatacccaggctagcatccccagtcagcaacat
gctcccaattccatacaaatcactcccacaaaaggttatcaagctcaagccattccacca
aatcaattctccggtcagcataataatggtcagaagagtgttcaagagttggtgttagaa
tatttggctcttcccacaatcagggaattggaggggggagtcttttgtggaactattgca
aagcaacttggagtttctttggataatgacgtcatacctgctcttgatcttcttagtgga
gaaggtgtcatttatgaaggtctaccaaagcactataagatatgttccgacggttga
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