Medicago truncatula (barrel medic): 11446416
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Entry
11446416 CDS
T01716
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X2
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mtr01002
]
11446416
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
11446416
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
11446416
Peptidases and inhibitors [BR:
mtr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
11446416
Ubiquitin system [BR:
mtr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
11446416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
V1R
Motif
Other DBs
NCBI-GeneID:
11446416
NCBI-ProteinID:
XP_003610327
UniProt:
G7JGQ7
LinkDB
All DBs
Position
4:complement(62770361..62778057)
Genome browser
AA seq
855 aa
AA seq
DB search
MAETLMVETETITKQHDPFQRKIEFIPVKKPFKGFSNDFNIETLNPTTSEHRQLVSANIQ
SSQPQPSKNSEFSEFGLDPELSLGITFRRIGAGLWNLGNTCFLNSVLQCLTYTEPLAAYL
QSGKHKSSCHIAGFCALCAIQNHVSCALQATGRIVSPQDMVGNLRCISRNFRKARQEDAH
EYMVNLLESMHKCCLPSGVPSESPGAFEKSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFL
DLSLEILKADSLQKALANFTAAELLDGGEKQYHCQRCKQKVQAVKQLTIHKAPYVLAIHL
KRFYAHDPNIKIKKKVRFDSALNLKPFVSGSSDGDVKYSLYGVLVHSGFSTHSGHYYCYV
RTSNNMWYTLDDTRVSHVGEQEVLNQQAYMLFYVRDKKSITPRKPVNIAKEEISKTNVIG
SRYPSTPTNALKDYPNGHVENKFCGVPLTAETQKNLLNADPSRISDALIQQKNSGILAKS
LMHNETPVSERTSKELTQMNSSDELPVAKSELECLSSLDHSGKDNVSGNQKCLVAPAGDK
PNLFTEDTLLKEGVDSPLVEPIVSNPQTFIGKHASDRTSPSDEKNSPAEVDAVAAQDSVT
NLSEHAGLVGTSNAVVPQGLVLKVSSKRSLKDSSLDQKQVKKSKKKFPKYKGSIMQLSLI
RPSMRCLGPRKKNHKKNRRCLLGLKYHSKEKLKKNAISSDVGPSISRKEHLRSSLMKHDA
EREIINRMDQNCAVLATATQVENMSRCSLQDDKRDQMQNTVVTQGLEETVVARWDDVELP
SSQALESKTDQIARIGYVGDEWDEEYDTGKRKKLRCLKQSFGGPNIFQEIATEKSKLKRA
KLDHSSFRNHPPIRI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactttaatggttgaaaccgaaactattaccaaacaacacgatccatttcag
agaaaaatcgaattcatacctgttaaaaaaccattcaaaggcttttccaatgattttaac
atcgaaaccctaaaccctaccacctccgaacaccgacaacttgtttccgctaatattcaa
tcatcgcagccacaaccttccaaaaattctgaattctccgagtttggtttggatccggag
ctcagcctcggaattacctttcgcagaataggtgctgggctatggaatcttggaaacact
tgttttctgaattcagttttgcagtgtttgacgtacactgagcctttagctgcatatctg
caaagtggcaaacataaaagttcatgccacattgctggattttgcgcgctttgtgcaatt
cagaatcatgttagctgtgcgctgcaagcaactggaagaatagtatcgccacaggatatg
gttggaaatctgcggtgcatatcacgcaatttccgaaaggctaggcaggaagatgcacat
gagtatatggtgaacttacttgagtcaatgcataaatgctgcctgccttctggagtaccg
agtgaatcacctggtgctttcgagaaaagtttggttcataagatctttggtggtcgtctt
cgaagtcaggtgaaatgcaggcagtgctcttattcctccaacaaatttgatccgttctta
gatttaagtcttgaaatcttaaaggcagattcactgcaaaaggcactggcaaatttcaca
gccgcagaacttttggatggaggagagaagcaataccattgtcaacgttgcaagcaaaaa
gtgcaggctgtcaaacagctaacaattcataaggcaccttatgtcctagcaattcattta
aagagattctatgctcatgaccctaacataaaaattaaaaagaaagttaggtttgactcc
gcactgaatttgaaacctttcgtcagtggctcatcggatggagatgtgaaatactcgtta
tacggggtcctggttcattctggttttagcactcactctggccactattactgctatgtc
cgcacttcaaataacatgtggtataccttggatgacactcgggtaagtcatgtcggtgaa
caggaagttctaaatcagcaagcttacatgttgttttatgttcgtgataaaaaaagtata
actccaaggaagcctgttaatatcgccaaggaagagatttcaaagactaatgttattgga
agtagatatccttcaaccccaaccaatgcactgaaagattatccaaatggtcatgtggaa
aataagttttgcggggtacctttgactgcagaaactcagaaaaatttgttaaatgctgat
ccatcaaggatatcagatgctttgattcagcaaaaaaatagtggcattttagcaaaaagc
ttaatgcataatgaaacccctgtatctgaacgtacttccaaggaacttacacagatgaat
tcatcagacgagcttcctgttgctaaatcagaacttgaatgtttatcatccttagatcac
tctggaaaagacaacgtgtctggtaatcagaaatgtttagttgcaccagctggagacaaa
cctaatctgtttactgaggatacccttttaaaagagggtgttgattctcctttagtagag
ccaatcgtgagtaatccccaaacttttattggtaaacatgctagtgacagaacatcaccg
tctgatgagaaaaattcccccgctgaagttgatgccgttgcagctcaagattcagtcaca
aatttgtcagagcacgctggccttgttggaacttcaaatgcagttgttcctcagggattg
gttcttaaagtttcatcaaaaagatccttgaaagactcaagtcttgatcaaaagcaagtg
aaaaaatcaaaaaagaagtttccaaagtacaagggatcaattatgcaacttagcttgatc
cgcccttcgatgagatgcctaggcccgcggaagaagaatcacaaaaaaaatagacgctgc
ttgttgggtttgaagtatcatagtaaagaaaagttgaaaaaaaatgccatttcatcagat
gttggaccatctatatcaagaaaagaacatttacgttcttctctgatgaagcatgatgct
gaacgagagattataaacaggatggatcaaaactgtgctgtgcttgcaacagctacacaa
gtagaaaatatgtcccgatgtagtctacaagatgataagagggatcaaatgcagaatact
gttgtgactcaaggtctagaggagacagttgttgctcgttgggatgatgtggaattacct
tcatctcaggccttggagtcaaagaccgaccagattgctcgcattggatatgttggggat
gaatgggatgaggaatatgacacaggaaagagaaagaagttaaggtgtttgaagcagagt
tttggtgggccaaatatttttcaagaaattgctaccgagaaatctaagttaaaaagggca
aaattagaccattctagcttcagaaatcatcctccaatcagaatataa
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