Medicago truncatula (barrel medic): 11446780
Help
Entry
11446780 CDS
T01716
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
11446780
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
11446780
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
Helicases
11446780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF2278
Motif
Other DBs
NCBI-GeneID:
11446780
NCBI-ProteinID:
XP_003596088
UniProt:
G7IQY0
LinkDB
All DBs
Position
2:complement(33534883..33541137)
Genome browser
AA seq
513 aa
AA seq
DB search
MEQPQPLVDQNFPLFKPSRKPSINPTLPISNKPQNDVVTHETLNSNPENTTATFSDLGLS
EWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQRLAEHTFG
VFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKELVARPHLVIATPGR
IKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATTTS
NLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLHILSKMEDMGIRSAI
VFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGRGL
DIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQLE
MIEYKENEVLSLMKKVFSAKNVAKMKMMDDGFEEKAKERKKQKLKMLEEKGLLKQRSKRK
RNKEFPKGNKQEKVELDASVDLTSLKKRSKKRE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccacaaccccttgtagaccaaaattttccactctttaaaccatctcgcaaa
ccttccattaaccctacactccccatttccaataaacctcaaaacgacgtcgttacacac
gaaacccttaattcaaaccccgaaaacaccaccgctacattctccgatctcggcctctcc
gaatgggcggtaaaaacctgcaaagaactcggaatgaaaactccacggcgcgtgcagcaa
cactgcatccctcagattctagctggccgtcatgtaatcggaatcgaccaaactggaagc
ggtaaaacagcggcatttgcgcttccgattctgcagcggcttgctgaacatacgtttggt
gtgtttgcgcttgtggtgacgcccacgcgcgagcttgcgtttcagttggcggagcagttt
agggcgcttggttcgtcgcttcggcttcggattgcggtggttgttggtggtatggatatg
cttagacagactaaagagttggttgctaggccgcatcttgttattgctactcctgggagg
attaaggttttgcttaaggataatcctgaaattgctccggttttcgccaggactaagttt
cttgtcttggatgaagcagatcgagtcctggatgttggttttcaggatgaattgaaattt
atatttcagtgcttaccagaaaaccggcaaaacctattcttttctgcaacaacaactagt
aatttgcaaaagttgcgtgagcgttatcaagataagttgtatgcctttgaagcttatgaa
gggtttaagacggttgagaaccttaagcaacaggttgtattcatccctaaaaatgtgaag
gatgtatatttgttgcatatcttgtctaaaatggaagatatgggtattaggtctgccatc
gtctttgtctctacatgcagagattgccatcgtttaaatttaatgctggaagtgcttgat
caagaagctgcagctttatattcattcagatcacaggctcagaggcttgaagcacttcat
gactttaaatcgggaaaggttcctgtattactagcaactgatgttgctggccgtggtctg
gatatacctacagttgaccttgttatcaattatgatgttccaaggtttccaagagattat
atccatcgtgttggtcgtactgcaagagcaggtagagggggactcgctttgagccttgtt
acccagaatgatgttgatctcattcgggaaatagagacccttattgaaaggcaacttgaa
atgattgaatacaaagaaaatgaggtcctttctctcatgaaaaaggttttcagtgctaag
aatgttgcaaaaatgaagatgatggatgatgggtttgaagagaaagcgaaagagcggaaa
aaacagaaactgaaaatgctagaagagaaaggattattgaagcaaagaagtaagagaaaa
agaaataaagaatttccaaagggaaataaacaggaaaaagtggaattggatgcatcagta
gatttaacatcactaaagaaaaggagtaaaaagagagaataa
DBGET
integrated database retrieval system
