Medicago truncatula (barrel medic): 120576852
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Entry
120576852 CDS
T01716
Name
(RefSeq) LOW QUALITY PROTEIN: alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00520
Amino sugar and nucleotide sugar metabolism
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120576852
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
120576852
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
120576852
NCBI-ProteinID:
XP_039683353
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All DBs
Position
7:40953379..40958054
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AA seq
648 aa
AA seq
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MIAQNILATMSFSHMFTAFLFSLIVCLVISECHADVNANASHISKLVIDARTRRPIPDTF
FGAFFEEINHAGAGGLWAELVDNRGFEAGGSNVSSNINPWIIIGDNSSSIIVSTDRSSCF
ECNKVALRSDVLCQGQSCPLGGVGISNPGFWGMNIEQGKKYKVVFYVRSLGPINLQVSFI
GSDDGVKLASTNISAFGVNVTKWSRMETILEANGTNHNSSLQITTSNRGVVWLDQVSAMP
LDTYKGHGFRSDLYQMAADLKPKTFRFPGGCYVEGDYLRNAFRWKDTVGPWEERPGHFND
IWNYWTDDGFGYFEGLQLSEDLGAFPVWVFNSGISHHDEVNTSDISPFVQEALDGIEFAR
GSSTSQWGSLRASMGHPEPFDLRFVAIGNEDCHKYNYLGNYLKFYEAIKHDYPDIQIISN
CDGSIHQLDHPADLYDFMXXSFFFFIYTDSKDMFSDYTKFDNAPRSGPKAFVSEYAVWKE
DAGAGSLYAAVAEAAFLIGLEKNRWIPDAIVFNSYQNYGTPSYWLQQLFIESSGATLLNS
TLQNSSSSIVASAIEYKNSQDGKNYLRVKVVNFGNATENFMISINGLNSIVQSSNSSMVV
LTSSNRMDENSFSEPNKIVPQRTALGNASNDMDVRLPPYSVTSFDLSI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgattgctcaaaatatattagcaacaatgtctttctcacatatgtttactgcttttctt
ttctctttgattgtgtgtttggtcatttctgaatgtcacgctgatgttaatgctaatgct
agccatatatcaaaattagtgattgatgcacgtactagaaggcctattccagacacattc
tttggagcattttttgaggaaattaatcatgcaggagctgggggattgtgggcagaactt
gtggataatagaggttttgaagcagggggttccaatgtttcatcaaatatcaatccatgg
ataattattggagataattcatcatcgattatcgtatcaactgatcgttcatcttgtttt
gagtgtaataaggttgctttacgttcagatgttctttgtcaaggacaatcatgtccactt
ggtggtgttggtatctccaatcctggattttggggcatgaacattgagcaagggaaaaag
tataaagtggtgttctatgttagatcacttggtcctattaatttacaagtttcatttatc
ggatctgatgatggagtaaaattggcttcaacaaacataagtgcttttggagttaatgtt
acaaagtggagtaggatggagacaattcttgaagctaatggtacaaatcataattcaagt
ctacaaataacaacaagcaatagaggggtagtatggttagatcaagtgtcagctatgccc
ttggatacatataagggtcatggttttcgaagcgatctttatcaaatggcggcggatctc
aagccaaaaacttttagattcccaggtggttgttatgtagaaggagattatctgagaaat
gcatttagatggaaagatacagttggaccatgggaagagagacctggccactttaatgac
atatggaattattggactgatgatggatttggttattttgaggggcttcaactatcagag
gatcttggtgcattcccagtgtgggtgtttaacagtggtattagccatcatgatgaagtt
aatacgtctgatatttcaccatttgtgcaagaagccctagatggtattgagtttgctaga
ggttcttccacatcacaatggggttctcttagagcttccatgggacatcctgagccattt
gatttgagatttgttgccattggaaatgaagactgtcataaatataactatctaggaaac
tacctaaagttctatgaagctataaaacatgattatcctgatattcaaattatctcaaat
tgtgacggttctatacatcaattagatcacccagcagatctctatgattttatgtaatag
tctttctttttttttatttatacagattctaaggacatgttttccgattataccaagttc
gataacgcaccaagatccggtccaaaggcatttgttagtgagtatgctgtttggaaggaa
gatgctggtgctggaagcctttatgcagctgttgctgaagctgcatttctcattgggctt
gaaaagaataggtggataccagatgcaattgtttttaactcttatcagaattatggaact
ccaagttattggctacaacaactctttattgaatctagtggagcaacattgcttaattca
actcttcaaaattcttctagctcaattgttgcatccgcaattgagtataaaaattctcaa
gatgggaagaattatctaagagtaaaggtagtcaactttggaaatgccactgagaacttc
atgatttcaataaatggtttaaattcaattgttcaatcgtctaattcatcaatggtggtg
cttacgtcctccaatagaatggatgagaattccttctcggagccaaataagattgtgccc
caaagaactgcacttggaaatgcaagcaatgacatggatgttagacttcctccttattca
gttacatcatttgatctatcaatctaa
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