Medicago truncatula (barrel medic): 120577316
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Entry
120577316 CDS
T01716
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic isoform X1
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00900
Terpenoid backbone biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120577316
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mtr01006
]
120577316
Enzymes [BR:
mtr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120577316
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120577316
2.5.1.29 geranylgeranyl diphosphate synthase
120577316
Prenyltransferases [BR:
mtr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120577316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
120577316
NCBI-ProteinID:
XP_039684415
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All DBs
Position
8:37456477..37459099
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AA seq
389 aa
AA seq
DB search
MPNPVQSRHFTLPPYHHNSIFISVINLSFNSTLSFSLLHCIFFSRVRMAPFTIATMPSLN
IGRFQKSPNRILPIRCSMAAPSPSSVSIRSKAVHFDLKTYWTSLMTQINQKLDEAIEVQF
PQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLP
CMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPSDLVPEPRVLRVIAEIA
RCVGSTGMAAGQFLDLKGGPNAVGLIQDKKFGEMAECSAVCGGLLAGAEDDEIERLRRYG
RAVGVLYAIVDDILEERLKPEGDKDRENSGKSYVEVYGVEKAAEVAEELRAKALEELDGF
EKYGDQVLPLYSFVNYAIDRSFNVDEASR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacccagtacagtcacgccatttcacactgccaccttatcaccacaactccatt
ttcatatcggtaatcaatctctcattcaactcaactctctctttctctctacttcattgt
attttcttctcacgagttagaatggctccttttacaattgcgacaatgccctctttaaac
atcgggcgtttccaaaagtctccgaatcgtatccttccaattcgctgctccatggctgct
ccttctccttcttcggtttccatccgatcaaaagctgttcactttgatttgaagacatat
tggacttctctaatgacgcagatcaatcagaagcttgatgaagccattgaagttcagttc
cctcaacagatatatgaagctatgaggtattctgcccttgctaaaggtgctaagcgatcc
ccccctgttatgtgtatatctgcttgcgaactcttcgggggcagtcgccttgctgccttc
cccactgcatgtgcccttgaaatggttcatgccgcttcattgatacatgatgatcttccc
tgcatggatgactccttgtcacgccgtggccagccctcaaaccacaccatctatggtgtt
gacatggcaattctggcgggtgatgcactctttccccttggatttcaacacattgtttca
catactccctctgaccttgtacctgagccccgtgtacttcgtgtcattgctgagatagcc
cgctgtgtgggttccactggaatggctgcagggcagttcttggaccttaaagggggccca
aatgcagttggattgatacaagataaaaagtttggtgaaatggcggagtgttctgcagtg
tgtggagggttgttggccggtgccgaagatgatgagatagagagactgaggaggtatggt
agagctgttggagtattgtatgctattgtagatgatattttggaagagagactgaaacct
gagggagataaagacagggaaaacagcgggaagagttatgtagaggtttatggggttgaa
aaagcagcagaggtagctgaagaacttagagcaaaggctttggaggaattggatggattt
gagaagtatggagatcaagtgttgcccctctacagttttgtgaattatgctattgataga
agtttcaatgttgacgaggccagtagatga
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