Medicago truncatula (barrel medic): 120577404
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Entry
120577404 CDS
T01716
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120577404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
120577404
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120577404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120577404
NCBI-ProteinID:
XP_039684650
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All DBs
Position
8:complement(36960134..36966624)
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AA seq
372 aa
AA seq
DB search
MEQRKLVVLGIPWHVDTDGLKEYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKN
VLSSEHSLGDRTLEVKVATPKEEMRAPVKKVTRIFVARIAPSVTEETFRSHFEKYGDITD
LYMPKDRGSKTHRGIGFITFATADSVENLMKETHELGGSDVVVDRATPKEDDFKPIGRTR
TPQLGYSAYSTYIPASTRYAALGAPTMYDRPSSIYGRGEPARGISKKIFVGRLPPEATTE
DLRLYFGRFGHILDVYIPRDVKRPGHRGFGFVTFADSGVADRVSRRPHEICGQEVAIDSA
APLDEAGPSGNTMLNSMDSFRGYGGPVRPYFDESPVRSYGRMYNSLDFDDQLGYGVASRR
PSRTTDWRYRPY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacgaaagcttgtggttttgggtatcccatggcatgttgatactgatggattg
aaagaatatatgagcaaatttggtgagctagaagattgtattgttatgaaggaacggtca
actggccgatctcgcggttttggatatgtgacattcgcatcggtggatgatgctaagaat
gtgctatccagtgaacacagtcttggtgacaggacgctggaagtcaaagtggccacacca
aaggaggagatgagggcaccagtcaaaaaggttaccagaatctttgtggccaggattgct
ccatcagtaacagaagaaacttttaggagtcattttgagaaatacggtgatataacagat
ttatatatgccaaaggatcgtggatcaaaaacacatcgaggaattggttttatcactttc
gcaactgcagattctgtggagaacttgatgaaagaaacccatgaactggggggttctgat
gtggtggttgatcgagcaacacctaaggaagatgatttcaagccaattggcagaaccaga
acaccacaattaggatatagtgcatatagtacttatattcctgcatcaactagatatgca
gcacttggcgctccaactatgtatgatcgtccaagttctatttatggaaggggagaacct
gcccgtgggataagcaaaaagatttttgttggtcgtcttcccccggaggcaaccactgaa
gatcttcgcctgtattttggaagatttggccatatcttagatgtttatattcctagggat
gtcaagagacctggtcatagaggttttggttttgtgacttttgcggacagcggtgttgca
gatcgtgtctctcgaagacctcatgagatttgtggacaggaggttgccatagattcagcc
gcacctcttgatgaagcaggtcccagtgggaatactatgttgaatagcatggattctttc
aggggatatggcggtccagtgaggccttattttgatgaaagtcctgtgaggtcttatggg
agaatgtacaatagcctggacttcgatgatcagttgggttatggagttgctagtagaaga
ccatcaagaacaacagattggaggtatagaccatactag
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