Medicago truncatula (barrel medic): 120577436
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Entry
120577436 CDS
T01716
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120577436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
120577436
03036 Chromosome and associated proteins [BR:
mtr03036
]
120577436
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120577436
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120577436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
120577436
NCBI-ProteinID:
XP_039684794
LinkDB
All DBs
Position
1:complement(38780858..38788366)
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AA seq
796 aa
AA seq
DB search
MQLIYPQFHPFGHSSSASGSSQSVFGQQNNSSNSPFAPKPFGSPTPFGSIAVNSTSGSTS
TGVFGAAQTPSRFSFGGSSMPAYGASSTPAFGSSMPAFGPSSTPVLGSSFFGQVPAFGGF
GYTPTQISPFGCSIQPAFGSSIFGLTGPPAFGSTGTASGATGAPVFCVTSTPVYFVINTP
VFFVTSTPAFGSTSTPAFDCTGGAFGMSSAPLFRGEGTFGASSNHAFGSSSTPAFEASSS
PAFGASAFGQSSSAFGTNSTFGRTTSTYGGSHTPAPGFGNADIGQSGFGGQRGGSRVASY
SATTEANCGRLEKLESISVMPVYKDKSHEELRWEDYQLGDKGGPLAFAPQPTGTGSWKLP
GCLCSAAFPHSTVFCPSSSNLSNSTTPNSYPFVPNTSTFSSGFGTSAPAFSSSAFGLSTS
AAAPSTFPSSTPLFGDNSSSQAFRPSASLFNTAARGTSAPFFTSSFRNTQPSQLFSSAAP
TNAQSASDFGQNTAPIGQTAALSQSSLFSSPPSGLVGNIYSSGASLSCNDPTGFGQTAPS
VSTPFQSAQPAQSSGTFSFSNFARTQPAGASSSGGTPGMFGQNNVGLRAIPQSSMVAQAA
PITDPFGTLSAFGTNSPFGSTTSAFGGQSSAFGSQTPTQAFGSTGIGQSGFGGQRGGSRI
ASYSATVEADSGASGHTAKLESISAMPVYKDKSHEELRWEDYHLGDKGSSAFGQKPAFGG
FGSNPTQTSPFGSATQPSQPAFGSNTQQSQPVFGSSILTPFGASSQPEFGSTCTPAFGAT
STPASAFGAPNSCMIQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttatatatccacaatttcacccttttggtcactcgtcgagcgcgtctggctct
tctcagtcagtgtttgggcagcagaacaattcaagtaacagtccttttgctcccaagcca
tttggtagtccaactccatttggatcgattgcggttaattctacgtcagggagtacttcc
acaggtgtatttggtgcagctcaaacgccgtctcgcttctctttcggtggtagttcaatg
cctgcatatggagcatcttcaactcctgcttttggtagttcaatgcctgcatttgggcca
tcttcaactccggttttgggatcgtcattctttggtcaggtgcctgcttttggaggtttt
ggctatacacctactcaaataagtccttttggatgctccatccaaccagcatttggaagc
agcatatttggtttaacaggcccccctgcttttggttctacaggcactgcatctggtgct
accggtgcccctgttttttgtgtaaccagcacccctgtttattttgtaatcaacacacct
gttttttttgtaaccagcacccctgcatttggttcaacctcaaccccggcttttgattgc
acagggggtgcatttggcatgtcaagcgctcctctgtttagaggtgagggaacatttggg
gcttcaagtaatcatgcatttggttcatcaagcacacctgcatttgaggcctccagctct
cctgcttttggcgcttctgcatttggtcaatctagttctgcatttggtaccaacagcaca
tttgggcgtacaacctcaacctatggaggatcgcatactcctgctccgggttttggaaat
gctgatattgggcagtcgggatttggaggacaacgaggtggaagtagagtagctagttac
tcagctacaactgaagcaaattgtggacgtcttgaaaaattggagtcaatatcagtcatg
cctgtttacaaagataaaagccatgaggagctaagatgggaagactatcaattgggagat
aaaggtggaccgcttgcctttgctcctcagccaactggtacgggcagctggaagttaccc
ggttgcctctgctccgcagcctttcctcattcaactgtattttgtccatcatcatccaat
ctttccaatagcacaacacctaattcttacccatttgtaccgaatacttctacattttct
tctggatttggaacatcagctcctgccttcagttcatcggcttttggtttatcgacatca
gcagcagcaccttctacttttccctcatccacacctctgtttggtgacaattcttcgtcg
caggcatttagaccatctgcatccctgtttaatactgctgctcgaggtacatctgcacca
tttttcacaagcagttttcgcaacactcaaccatcccaattatttagctctgcagcccct
acaaatgcacagtctgcttctgatttcggtcagaataccgctcccattgggcagactgct
gctttaagtcaatcaagcttgttcagttcacctccatctgggcttgttggaaacatttac
tcaagcggtgcatcactctcatgtaatgatccaacaggttttggtcaaacagcgccatca
gtgtcaacgccattccaatctgcacaacctgctcagtcaagtggcactttttcctttagc
aactttgcccggacacaacctgctggtgcaagtagctccggtggaactccgggcatgttt
ggtcagaataatgttggacttcgggctattccccaaagttctatggttgcacaagcagca
cccattacagacccatttggaacactttctgcatttggcaccaacagcccatttgggagt
acgacctctgcttttggaggtcagagttctgcatttggatcacagactcccactcaagca
tttggaagtactggtattgggcagtcaggatttggaggacaacggggtggaagtagaata
gctagttactcggctacagtggaagcggatagtggtgcctctggacatacggcaaagttg
gagtcaatatcagccatgcctgtttacaaagataaaagccatgaggagctaagatgggag
gactatcatttgggagataaaggatcatcagcgtttggtcagaagcctgcttttggaggt
tttggctctaatcctactcaaacaagtccatttggaagtgccacccaaccatcacaacca
gcatttggaagtaacacccaacagtcgcaaccagtatttggaagcagcatattaacacct
tttggcgcttcatcccagccagaatttggttcgacatgcactcctgcatttggtgctact
agcacccctgcgtctgcctttggtgcacccaacagttgcatgattcaatag
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