Medicago truncatula (barrel medic): 120578306
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Entry
120578306 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120578306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
120578306
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120578306
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120578306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Sina_ZnF
Rad60-SLD
Sina_RING
DUF2604
Plexin_RBD
DUF4853
Dsc3_N
Rad60-SLD_2
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
120578306
NCBI-ProteinID:
XP_039686910
LinkDB
All DBs
Position
2:16885903..16887935
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AA seq
333 aa
AA seq
DB search
MEPVDAAKDVGKNSSISVMISNPKVFDCSICFQLLSFPIFQCDNGHIVCSTCCSKFGNKC
DKCSKCISLKRCRAFENLLQYIKMPCLNEKYGCKETIDYIQKRKHEEECIYVPCYCPLSG
CDFVASSEVLSDHFSHKHEDSQINFYYGFSFLVSLKSDDEVIVLQEKRSGKVFILNNSTM
LYSKKNYSTMLLGNAVNICCFGPTASVSEYSYDISARSQKCKLKLHSFAKNLHQVTLATL
SSEFLVIPIGSSEPLELMRIFVNLLTGETITLEVNSLDTICSVKEKILDETEYSMQSQRL
IFAGKQLDDSRTVADYNIQNESTIDVAFRILGD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgttgatgcagcaaaagatgttggcaagaatagctccatttctgtgatgatt
tcaaaccctaaagtgttcgactgcagcatttgttttcaactcttaagctttccaatcttt
cagtgtgataatggtcatattgtttgctctacctgctgctctaagtttgggaacaagtgt
gacaagtgctcaaaatgcattagcttaaaacgttgtagagcctttgagaatctattgcaa
tatatcaaaatgccatgtctgaatgaaaaatatggttgcaaggagacaatcgattacatt
cagaagaggaagcatgaagaagaatgcatctatgtgccatgttattgccccctttcaggt
tgtgactttgttgcttcatcagaggtgttgtccgaccatttcagccataaacacgaggat
tctcaaatcaatttttattatggattttcttttcttgtctccttgaagtctgatgatgaa
gtcattgttcttcaagagaaacgtagtggcaaagtatttattctcaataatagtactatg
ctttattcaaaaaaaaattacagtactatgcttttgggaaatgcagtcaatatttgttgc
tttggtccaactgcttctgtgtccgagtatagttatgatatatcggctaggtctcagaaa
tgcaaactgaaattacactcgtttgcaaagaatttgcatcaagttactttagcaactctt
tcatcagagttccttgtgattccaattggttcttctgaacctctcgagcttatgcgaatc
ttcgtaaatttactgactggagagacaatcactttggaggttaatagtttagacacgata
tgcagtgtgaaagagaagattcttgatgagacagagtactcgatgcagagccaacgattg
atctttgccggcaagcaactagatgacagccggactgttgccgattacaacattcaaaat
gagtcaaccatcgacgttgccttccgcatccttggggactag
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