Medicago truncatula (barrel medic): 120579946
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Entry
120579946 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120579946
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retrotrans_gag
gag-asp_proteas
Asp_protease_2
Ty3_capsid
SieB
DUF5712
Motif
Other DBs
NCBI-GeneID:
120579946
NCBI-ProteinID:
XP_039688648
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All DBs
Position
4:23912015..23934218
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AA seq
1054 aa
AA seq
DB search
MLAAEQENTQLREELVNLKGEMERMALMMETMMAEREQAAISNSTPVVVVTAAPEGPPQP
SPTTTTTIGLTQPLMTDFSSGNMATMGNSGFRPLGPQGPFATPQYSMPSGYPWGMPIATN
GGFGPGATEMPFTQGQQTSAPFQMSQPIPQATMTQAGPTVHVGPQHEEQIYHSDSIMGDD
KAIDWEERFGALEKKMSNMRGKETVVQSIYDLCLVPDVNIPPKFKMPVFEKYQGDTCPQN
HLTMYIRKMIAYKNNVPLLIHCFQDSLTGPADTWFMGLKGVTTFEQLAEAFMQQYKYNTY
LAPSRKELQSLTQKEKESFKEYAQRFIQKAAQIRPPLDERELSELFYETLSPCYSEKMIK
FTDLVETGMRIEEWARKGAAVSGSSSGGSSGVLSNGNKKFGNGYPKRNAQEVGMVAHGGP
QPVYPNHPFVANITPQMTAPQNPNYQSPRPQGPAPYYPPLYQPLYNLQQFPQQPYYPQQP
YQQRPQQQPRPQAPHNQQNQRQQFDPLPMTYGALLPSLLAQNLVQTIPPPRIPDPLPRWY
RPDLHSRNNPLPTHGPAVNMIQDDQEEARILSVGDIKTPLVPIHVKMCRATLFNHNHEAC
DICSMDPRGCIQVQNDVQGLLNRRELVVTREPESKDVCVVTPVFRARRPLVINPNSTKPV
GTPLVICVPRPTPTTAQKAVPYKYEGTILEPGSETTSPVAVDNIAENSRILRSGRILPTV
GPKSVSVPVDEPVKERNAGKGKAGEQAKEVDFEDADEVLKLIKKSEYRVVDQLLQTPAKI
SIMALLSSSGAHRDALKKVLDQAFVDYDVTLGQFESIVGNVTACNSLTFSDEDLPAEGNK
HNQALLISVLCRTDSLSNVLIDTSSALNVMPKSTLDQLAYSEAPLRLSKVTVRAFDGTRR
SVYGEVDLPISVGPHEFQVTFQVMEIQASFSCLLGRPWIHDAGAVTSTLHQKLKFVSRGK
LITVSGESAFLIRNLSAFSVIGGSGSDGPSFQGFSAEESVGKIETCMASLKDARRVIQEG
KTEGWGQLVELPENKQVLSTVLVSFMIRQRPMQF
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggcagaacaggaaaacactcagctcagagaggaactggttaacctcaaggga
gagatggaaagaatggcacttatgatggaaactatgatggctgagagagagcaagcagca
atctccaattcaactcctgttgtggttgtcacagctgcacctgagggtcccccgcaacca
tctccaactactactacaactatcggcctcacccaacctctgatgactgatttttcttct
ggtaatatggcaactatgggtaactcaggcttccgtcctctgggcccccagggtcccttt
gctactcctcagtattccatgccttcaggctacccttggggcatgccgattgcaactaac
gggggttttggtccaggcgctactgaaatgccattcacacagggtcaacagacttcggca
cctttccagatgagtcaaccgattcctcaagctaccatgactcaagcaggtcctactgtg
catgttgggccacaacatgaagagcagatttatcactccgacagtataatgggggatgat
aaagctatcgattgggaagaaaggttcggtgctctagagaagaagatgagtaatatgcgg
gggaaggaaacagtcgtccaaagcatatatgacctttgcttagtaccagatgtaaacata
cctccaaagttcaagatgcctgtatttgagaagtatcaaggggacacgtgtccacaaaat
catctaactatgtatattaggaagatgatagcttacaagaataatgttcccttactcatt
cactgcttccaggatagtttgactggtccggcagatacctggttcatggggttgaaagga
gtcactacttttgaacagttggctgaggccttcatgcaacagtacaaatataatacctat
ttggcgccaagtcgcaaagagttgcagtccttaacccagaaagagaaagaatcgttcaaa
gaatacgcacaacgcttcattcaaaaagctgctcagattcgtcctcccttggatgagagg
gaactttcagaattgttctatgaaaccctgagcccttgttattcagaaaagatgattaag
ttcactgacttggtggaaacaggaatgcgtatcgaggagtgggctcgtaagggagcagct
gtttcgggaagttcttcaggtggttcttcaggggttttgtccaatggtaataagaaattt
gggaatggttacccaaagaggaatgctcaagaggttggcatggtggctcatggaggacct
cagcccgtgtaccctaatcacccctttgttgccaacatcaccccacaaatgaccgcaccc
cagaacccaaactatcaatcacccagacctcaaggacctgcaccatactaccccccatta
taccaaccactatacaacctacaacaattccctcaacaaccatattacccccaacaacca
taccaacaaagaccacagcaacaaccccgtcctcaggctcctcacaatcagcagaatcaa
aggcaacaatttgaccccttgccaatgacctatggagcattgctcccttctttacttgca
cagaatctggtccaaacaataccacctcctcgcattccagaccctctcccacgctggtac
cgtccggaccttcattctcggaacaatcctctgcctactcatgggcctgctgttaatatg
attcaagacgatcaggaagaggctcgcattctctctgtaggtgatatcaagactcctctg
gtaccgatacatgtgaaaatgtgtagagcaactctcttcaaccacaatcatgaagcttgt
gacatatgttcgatggatcctcgtggatgtatacaagtccagaatgatgtgcagggtctc
ctaaatagaagggaacttgtggttacaagggaacccgagagcaaggacgtctgtgttgtc
actccggtattcagagccaggaggccgctggtgataaaccccaacagtacaaaacccgtt
ggtactcccttggtaatctgtgtgcctaggcccacgcctactactgctcagaaagctgta
ccctacaagtatgaaggcacgattctagagcccggaagtgagacaacttcacctgttgct
gtggataatatcgcagagaatagccgaattttgaggagtggccgcatccttcccacggtg
ggtccgaagagtgttagtgttccggtcgatgagccagtaaaagagcgaaacgccggtaaa
ggtaaagctggggagcaggccaaagaggttgactttgaggatgccgatgaagtcttgaag
ctgatcaagaagagtgaatacagggtggtggaccagctgttacaaactcctgcgaagatt
tccatcatggccctgttgtcaagttctggtgctcatcgggatgccctgaagaaagtacta
gaccaggcatttgtggattatgatgtaactctgggtcaattcgaaagcattgtggggaat
gtgaccgcgtgtaacagtctgactttcagtgatgaagatctcccggcggaggggaataag
cataatcaagcattactcatctctgtactttgcagaacggactcgttatccaacgtcctg
atagataccagctctgcacttaatgtgatgcccaagtcaactctcgaccaattggcgtac
tccgaggctcctttgagacttagcaaggtgacggtgagggccttcgatggaactaggaga
tcggtgtatggtgaggtagatttgccaatttcggtcggcccacatgaatttcaggttact
ttccaagtcatggaaatccaggcttctttcagctgtttgctcggcagaccatggattcat
gacgctggggctgtgacatctactctccatcagaaattgaagtttgtaagtcgtggaaag
ttgatcactgtgagtggcgaatcggcctttttaatcagaaatttgtctgctttctctgtt
atcggtggtagtggttcagacgggccatcattccaagggttctctgccgaagaaagtgtc
ggcaaaattgagacttgtatggcttcgttgaaggatgcccggagagtaattcaggaaggc
aaaaccgaaggctggggtcagctagtggagttgccagaaaacaagcaggttctttccaca
gtgctggtttcattcatgattcgccagagaccaatgcaattttag
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