Medicago truncatula (barrel medic): 120580073
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Entry
120580073 CDS
T01716
Name
(RefSeq) ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00630
Glyoxylate and dicarboxylate metabolism
mtr00710
Carbon fixation by Calvin cycle
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
mtr01200
Carbon metabolism
Module
mtr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
mtr_M00532
Photorespiration
mtr_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120580073
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120580073
Enzymes [BR:
mtr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
120580073
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
120580073
NCBI-ProteinID:
XP_039688976
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All DBs
Position
4:complement(12652642..12655226)
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AA seq
482 aa
AA seq
DB search
MNRRGGFMSPQTETKATVGFKAGVKDYRLTYYTPDYETKDTDILAAFRVSPQPGVPAEEA
GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSV
TNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKYGRPLLGCT
IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETG
EIKGHYLNATAGTCEDMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHI
HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDF
VEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
APGAVANRVALEACVQARNEGRDLAREGNEIIREATKWSPELAAACEVWKEIKFEFPAMD
TI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaataggagagggggatttatgtcaccacaaacagaaactaaagcaacggttgggttc
aaagctggtgttaaagattatcgattgacttattatactcctgactatgaaaccaaagat
actgatatcttggcagcattccgagtaagtcctcaacctggagttccggctgaagaagca
ggtgcagcggtagctgccgaatcttccactgggacatggacaaccgtgtggaccgatgga
cttaccagtcttgatcgttataaaggacgctgctaccacatcgaacctgttgctggagaa
gagagtcaatttattgcttatgtagcttatcccttagacctttttgaagaaggttctgtt
actaacatgtttacctccattgtaggtaatgtatttgggttcaaggccttgcgtgctcta
cgtctggaagatttgcgaatccccgttgcttatgttaaaactttccaaggtcctcctcac
ggaatccaagttgagagagataaattgaacaaatatggacgtcccctattgggatgtact
attaaacctaaattgggtttatccgctaaaaattacggtagagcagtttatgaatgtcta
cgtggtggacttgattttaccaaagatgatgaaaatgtgaactcccaaccatttatgcgt
tggagagaccgtttcttattttgtgccgaagctatttataaagcacaggccgaaactggt
gaaatcaaaggacattatttgaatgctactgcgggcacctgtgaagacatgatgaaaaga
gctgtatttgctagagaattgggcgtgcctatcgtaatgcatgactacttaaccggtgga
ttcactgcaaatactaccttggctcactattgccgcgataatggtctacttcttcatatc
caccgtgcaatgcatgcagttattgatagacagaaaaatcatggtatgcactttcgtgta
ttagctaaagcgttacgtatgtcaggtggagatcatattcacgctggtactgtagtaggt
aaactggaaggagaaagggatattactttaggttttgttgatttactacgtgatgatttt
gttgaaaaagatagaagtcgcggtatttttttcactcaggattgggtttctttacctggt
gttctgcctgttgcttcaggtggtattcatgtttggcatatgcctgctctgaccgagata
tttggagatgattctgtacttcaattcggtggaggaactttaggacacccttggggaaat
gcacctggtgccgtagcgaatcgagtagctctggaagcatgtgtacaagctcgtaatgaa
ggacgtgatcttgctcgtgagggtaatgaaattatccgtgaagctaccaaatggagtcct
gaattagctgctgcttgtgaagtctggaaggagatcaaatttgaattcccagcaatggat
actatttaa
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