Medicago truncatula (barrel medic): 120580657
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Entry
120580657 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC120580657
Organism
mtr
Medicago truncatula (barrel medic)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIF1
Helitron_like_N
Pif1_2B_dom
AAA_30
Herpes_Helicase
B3
CbiA
AAA_25
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
120580657
NCBI-ProteinID:
XP_039690627
LinkDB
All DBs
Position
5:complement(23733305..23741428)
Genome browser
AA seq
1999 aa
AA seq
DB search
MDVNKKKENASIARLKRRYVLKSKRSKKQKIYTQGPSNPLGDITNISVKLSISRLQNINN
VRTSEFNAFTSPAYTPRFTFPINTPTLPHHKSTTGSTKTSHFPISSPTLREAGSSKNNVH
AKLTTVRSAKYNFSINTPNLPEDGLSNMKMKENVAPVMSPPHSFPINAPTLPHLRSSGNK
MKENFTPLRGPTYHFPINTPIFTHLGSSQQKMNQNLTPVKSPTYNFPINTPTMPQPQSSQ
QKGKDKITPTNSTPNFMPNCTQPTSSYQVKSSTRRRPNFNQMGVNLMDRFTANTPDVPSS
STPNVEINDSSNGMQIDDDTSSIDSEELQAYIPTQDSDESDTSDTDLEDQESPFNDMRLN
GTSQVGHGEYSDIGDPSIECQKCGACMWYQERKNKSRNSAQPKYNMCCSNGNVQIPFLPQ
PPPLLQHLMFDHSATESKKFQDNIRLYNSMFAFSSPGFKVDKGIKAGKGPPTIRIQGQAC
HRIGSMIPLPGKRPKFAQLYIYDTDNELKNRIQGLSNPKSVNIETAARLQQMLDEKNCHA
KSFRKARDRLRNNNVQDFKLKLISDRTTDGRVYNQPTVSEVAALIVGDVDSASKRDIIME
RQSGQLERIDEFHPAYLAYQYPLLFPYGEDGYRDDVLHRNVVDGCTRKREKLTIREWLSF
RLQAMRMEAMTILCARRLFQQFLVDGFTMMEADRLKWLRRNQSKLRVGKYKNLNQTPSDG
DDQSGKQGKRVVLPSSYVGGRRYMDQLYFDGMAISSSVGFPDLFITFTCNPNWPEIQRVV
GPLHLKAHDRPDIVVRVFKIKFDELLNDLTKNHILGRVVACNKYPTPEHINKIISAEIPS
PVHQKELYKLVGTHMMHGPCGLANISSPCMKKDRCSKYFPKKFQNETVVDHEGYPVYRRR
DNGRHILKKGITLDNRHVVPHNPYLLMKYQAHINMEWCNQSSSIKYLFKYINKGYDRITA
AVVPDKSNQGNVKDTNADEIKKYLDCRYVSPSEACWRIFAFPIHGRKPSVERLFFHLHGE
QSVYFNDYEEMDEVLLKPSVTESMFTSWLECNARYPEAKSLTYSKFVSKFVYKKQQRTWK
PRKKGFTIGRLMWVPPSTGEVYYLRRMLTCVKGPTSYEDIKTVNNILYDTFREACYAMGF
LEDDKEYIAAIKEASVWATGVFLRILFVTLLLSASMDRPIHVWNNTWQWLSDGVLYEQRK
VANNPGLNLTEEQIKNLTLTLIEKHMDKNRRSLKEFKGFPYPTGYVMEELGNRLIYDELN
YDVNALKAEFETLFILLTAEQKMIYQKIITAVNSNKGGVFFLNGYGGTGKTFMWTTLAAS
LRMRSKIVLTVASSGIASLLLPGGRTAHSKFKIPVPTLDNSTCNIDGGSELAQLLKVANL
IIWDEAPMAHRNCFEALDRTLKDIMSVTSNSNKIFGGKVVVFGGDFRQILPVVPGADRSE
IVHGSISSSYIWDHCQVLTLTKNMRLQQSCKSEDPIELKKFSEWILNVGEGKIAEPNDGF
AEIDIPDEFLIKDFDNPIDAIVKSTYTDFLDNYNNPDYLKQRAILASTIDVVDSINDYVL
TMIPGQEKEYLSSDSIDKSEINDECQSFEILTPEFLSTLRTSGLPNHKIKLKIGTPIMLM
RNLDQAEGLCNGTRLIVTRMADHIIEAKIISGKNIGNLTYIPRMNMSPSQSPWPFKLNRM
QFPIILSYAMTINKSQGQSLDKVGLYLPKPVFGHGQLYVAFSRVKSKKGLKILIHDSDNK
SLTSTMNVIYKEVFENLWYFFFCLLKSSRNNNQIPMQLVTCGLASYLGSVSDYVEVEPTF
VQKHFNDLKDSWTILNHSDETHCLKFNKSFVNPILTKGWSALQIYHDFPDNVEILFAYYG
NNLYFVEMFKEITDNTCIPPFHSRSKMPLHTIHFDNHLTEADFNNSDMVVEEDFAMFIKH
NGIHNLTLCGDDGKEQYFEVYFLTDHNLTTLLGINWDKFCKSNNFKMEQKIRFKFYTSDL
SKCHVYPVMIPTSFPYTLG
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaacaagaagaaggaaaatgcttctattgcaaggttgaaaagaagatatgtc
cttaaatctaagaggtcaaaaaaacaaaaaatctatactcaaggtccatctaatccttta
ggggatatcactaacatatcagttaaactcagcattagtagattacaaaacataaacaat
gttagaacttctgagtttaatgctttcacatcccctgcttatacaccaagatttactttt
cccatcaatacccccactttgcctcatcacaagtccacaacaggttccacaaaaacatcc
cattttcccattagtagtcctactttgcgtgaagctggatcatctaagaataatgttcac
gcaaaattaacaactgttaggtcagcaaaatacaatttcagcatcaatactcctaattta
cctgaagatggattatctaatatgaagatgaaggaaaatgttgcaccagttatgtcacca
ccacacagttttcccatcaatgctcctactttgcctcatcttcgatcatctggaaataag
atgaaagaaaacttcacacctcttaggggaccaacataccattttccaataaatactcct
atttttactcatcttggttcatctcaacagaagatgaaccaaaacttgacacctgtaaag
tcacctacttacaatttcccaatcaatactccaactatgcctcaacctcaatcatctcaa
caaaagggaaaggataagattacaccaacaaattctacacctaattttatgcccaactgc
actcagccaacctcctcatatcaggttaagtcctcaacgaggagaagacctaattttaat
caaatgggagtgaatctaatggatagatttactgcaaacacacctgatgtgccttcttca
tcaacgcctaatgttgagattaatgactccagcaatggaatgcagattgatgatgatacc
agttctatagatagtgaagaattacaggcatacattcctacacaagatagtgatgaaagt
gatacatctgataccgaccttgaggatcaagaaagcccatttaatgatatgaggctaaat
gggacttctcaagtaggtcatggagaatattctgatattggagatccatcaatcgaatgt
caaaaatgtggagcatgcatgtggtatcaagagcgtaaaaacaaatcaaggaatagtgct
caaccaaaatataacatgtgttgcagcaatggtaatgttcaaattccatttttgccacag
cctccgccattgctgcaacatttaatgtttgatcactcagccactgagtcaaaaaaattt
caggataacatacgactatacaatagcatgtttgcatttagttcacctggctttaaagtt
gataagggaattaaagcaggaaaaggtcctcctactataagaattcaaggtcaagcatgc
cataggattggaagtatgattccattacccggaaaacgtccaaagtttgcgcaactatat
atatatgacacagacaatgaattaaaaaatagaatccaaggtctcagtaatccgaagtcg
gtgaacattgagacggctgccagactacaacaaatgttggatgaaaagaactgccatgcc
aagtcttttagaaaggcacgtgatcgactgaggaacaacaatgtccaagattttaaacta
aagctcatttctgataggacaactgatggaagggtttataatcaacctactgtatccgaa
gtggcagcgctgatagtcggtgatgtcgactcagcatcaaaaagggatatcataatggaa
aggcaaagtggtcagctagaaagaattgatgaatttcacccagcatatcttgcatatcaa
tatcctctactgttcccttatggtgaggatggttatagggatgatgttttacacagaaat
gttgtcgatggttgtacccggaaaagagaaaaactgacaatcagagaatggttatcattc
agactacaagcaatgagaatggaagctatgacaattttgtgtgcaagaagactatttcaa
cagtttttggttgatggttttacaatgatggaagctgataggttgaaatggttgaggagg
aatcagtccaaattgagggttggaaagtacaaaaacttgaatcaaacaccatcagatgga
gatgaccagtctggaaaacaaggtaagagggttgttttaccatcaagctatgttggaggc
cgtagatatatggatcaactatatttcgatggtatggccatttcaagttcagtgggattt
ccagatttatttataacatttacttgcaatccaaactggcctgaaattcaaagagttgtt
ggacctctacatctaaaagcacatgaccgtccagatatagtagtaagagttttcaaaatc
aaatttgacgaacttttgaatgatttaactaaaaatcatatccttggcagagtagttgca
tgtaacaaatatcctactccagagcacattaacaagattatatctgctgagataccaagt
ccagttcaccagaaagagctatacaagttggttggcactcacatgatgcatggaccgtgt
ggtttagcaaatatcagttctccttgcatgaagaaagatcgttgttccaaatactttcca
aaaaaattccaaaatgaaactgttgttgaccatgaagggtatcctgtttacagaagaaga
gataatggtaggcatattctgaaaaagggaataactttagacaatcgtcatgttgttccg
cacaatccttatctcctaatgaagtatcaagctcatatcaatatggaatggtgtaaccaa
tcaagttcaattaaataccttttcaagtatatcaacaaaggttatgaccgcataactgca
gccgtggttcccgataagtcaaatcaaggtaatgtcaaggatactaacgctgatgagatc
aaaaagtacctagactgtcgttacgtatcaccaagtgaagcatgttggagaatatttgct
ttcccaattcatggtaggaaaccttctgtggaacgattgttttttcatttgcatggagaa
caatctgtgtactttaacgattatgaagaaatggatgaagtcctcttgaagccttcagtc
acggaatcaatgtttacatcttggcttgaatgcaatgctcgatatccggaggctaaatca
ctaacttattctaagtttgtttcaaagtttgtatataaaaagcaacaaagaacatggaag
ccaaggaagaaaggattcaccattggtaggttgatgtgggttcctccaagtaccggagaa
gtttactatttgaggaggatgttaacttgtgttaagggaccaacttcttacgaagatatc
aaaactgtgaataatattctatatgatacttttagggaagcatgctatgcaatgggattt
ttggaagatgataaagaatacatagctgcaatcaaggaagcaagtgtttgggctacaggt
gtatttctgaggatattgtttgtgacccttttgctttcagcttcaatggatagaccaata
catgtatggaataatacttggcaatggttaagcgatggtgtcctatatgaacaaagaaaa
gtggctaacaatccaggtcttaatcttacagaagagcaaatcaaaaatctcactctaacc
ttgattgaaaaacacatggacaaaaataggagatcacttaaggaattcaaaggctttcca
tatccaactggatatgtcatggaagaacttggcaataggctaatatatgatgaacttaac
tacgatgttaatgcattaaaggctgaatttgaaacactgttcattttacttacagctgaa
cagaaaatgatttatcagaaaatcattacagcagtaaatagtaataaaggtggtgtattt
ttcttaaacggttatggcggtactgggaaaacatttatgtggacaaccttagctgcatct
ttgcgcatgaggagtaaaattgttttaactgttgcatccagtggtattgcttctctgtta
ttacctggaggtcggacagctcattcaaaattcaaaattcctgttcctacacttgataac
tcaacgtgtaacatagacggaggcagtgaactagcacaacttctcaaggttgctaacttg
atcatctgggatgaggcacctatggcgcatagaaattgttttgaagcactagatagaaca
ctcaaggatattatgtctgtaacttcaaattcaaacaaaatctttggtggaaaagttgtt
gtttttggaggagacttccgccaaatcttgccggtagtaccaggggcagatagatcagaa
attgtacatggatctataagttcatcttatatatgggatcactgccaagttctcactctc
accaagaacatgcgcttgcaacaaagctgcaaatcagaggatcctattgaacttaaaaag
ttttctgaatggatactgaatgttggtgaaggaaagatagctgaaccaaatgatggtttt
gctgagattgacataccagatgaatttttgatcaaggattttgataatcctatagatgca
attgtgaaaagcacttatactgatttcttggacaattacaacaaccctgattacttgaag
caaagggcaattttggcttcaacaattgatgtagttgattccatcaatgattatgttctc
acaatgatcccaggacaagaaaaagaatatctgagttcagattccattgataaatcagaa
atcaatgatgaatgccaatcttttgaaatactcactccagagtttttaagtacccttaga
acatctggacttcctaaccataaaatcaaactcaagattggtactccaattatgcttatg
aggaatttagatcaagctgagggattatgcaatggtactagattaattgttacaagaatg
gcagatcatattattgaggccaaaatcatttctggaaaaaacattggaaatctaacttac
attccaaggatgaacatgtctccttcacaatctccatggccttttaaacttaatagaatg
cagtttcctataattttatcatatgccatgactattaataaatcacaagggcaatctttg
gacaaagttggactttacttgccaaaaccagtttttggccatggccaattgtatgttgca
ttttcaagagtcaaaagcaagaaaggtttaaagatattaatccatgattctgataacaag
tcacttacttcaacaatgaatgttatctacaaggaagtttttgaaaatctatggtacttt
ttcttctgtctcctaaagagtagtaggaacaataatcaaattccaatgcaactggtcaca
tgtggacttgcaagttatttgggaagtgtttctgactatgttgaagttgaaccaaccttt
gttcaaaaacatttcaatgatctgaaggattcatggactattttaaatcacagtgatgaa
acacactgcttaaagttcaacaaaagttttgtcaatcctatcttaactaaaggatggtct
gctcttcagatttatcatgatttccctgataatgttgagatcctgtttgcctattacgga
aataatttgtactttgtggaaatgttcaaagagatcacagataatacctgcattccacca
tttcacagtcgcagcaaaatgcctctacataccattcactttgacaatcatcttactgaa
gctgacttcaataattctgatatggtggtggaagaagattttgccatgtttataaagcat
aatggaatccataatttaacactttgtggagatgatggcaaagaacaatattttgaagtt
tatttcctaactgatcacaatcttactactctacttggcattaactgggacaaattctgc
aagtcaaacaatttcaaaatggagcaaaaaatccgtttcaaattctacacttctgatttg
tctaagtgtcatgtgtatccggtcatgatacctacatcttttccgtatactttggggtag
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integrated database retrieval system
