Medicago truncatula (barrel medic): 120580680
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Entry
120580680 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120580680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
120580680
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120580680
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120580680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
120580680
NCBI-ProteinID:
XP_039690669
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All DBs
Position
5:complement(33963676..33964688)
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AA seq
244 aa
AA seq
DB search
MDHLMYSNPKLLDCCNCSQPLTIPVFQCDNGHIFCSTCYPKLGNKRHKCSLRISSKRCKA
IENLLLSIEMSCPNVNHGCNEKISCIGKRKHEEECIHVPCCCPVSSCDFVASSEVLSKHF
SDKHGDSHIKFSYGHSLIVYIKSNDETIVFQEETYGKLFILYNRATLLGNAINICCIGPN
SFESEYRYYILARSQMCKLKLQSFAKDVQRVAFATPSSEFLLIPFGSSFIVILTDRCSDS
CSRV
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctgatgtattccaacccaaaattgcttgattgctgcaattgttctcagccc
ttaactattcccgtctttcagtgtgataatggtcatattttttgctctacctgctatcct
aaacttgggaacaagcgtcacaagtgctcgttgcgtattagctcaaaacgttgtaaagcc
attgagaatctattgctatctattgaaatgtcatgtccgaatgtaaatcatggttgcaat
gagaaaataagttgcattggaaagaggaagcatgaagaagaatgcatccatgtgccatgt
tgctgccctgtttcaagctgtgactttgttgcatcatcagaagtgttgtctaagcatttc
agcgataaacacggggattctcatatcaaattttcttatggtcactccttaattgtctac
atcaagtctaatgatgaaaccattgtttttcaagaggaaacttatggcaaactatttatt
ctctataatagagctacacttttgggaaatgctatcaatatttgctgtattggtccaaac
tctttcgagtctgaatatagatattatatattggctaggtctcagatgtgcaaactgaaa
ttgcagtcttttgcaaaggatgttcaacgtgttgcgttcgcaactccttcctcagagttc
cttttgattccatttggttcttcttttatagtaattctcacagataggtgcagtgactcc
tgcagtagagtttga
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