Medicago truncatula (barrel medic): 120580923
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Entry
120580923 CDS
T01716
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
120580923
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120580923
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
120580923
NCBI-ProteinID:
XP_039691163
LinkDB
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Position
6:complement(39468663..39485869)
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AA seq
716 aa
AA seq
DB search
MENKRWLNIVVDGNKALEKYWTDILSNYLEKIVRCFVGESQEQESYLGLVLYNANSELVE
AGYDMQFINWTKDVNKFMENLSHLSFNGNDANQSTMAEGLAEALVMYPKPCDTMTEREYY
ISERHCILVAPGDPAPKSMLVCLPMIQRAQVIGQRLKACQADFLEVAKTCIPLSVSLSVI
TPNPVPIFGAIFNMGNNALTLSNAPISSYSTGQLTVLLSKNFREAHVALKEKGIMEYPST
TSVGSISAAPDTTLFRAFSTNLQEEQVSSSMAIGDTIRETDNTITPEPVSTSQHNSQENI
VQMNLYEDIMSELDDDDLFTPNKRSKTFAPLEDDPDLQDFFKFDQNPFEGFDQFIKQDQQ
VFNQQEIPTEEAVFNQQQIPTEEAGVDFANELQEILNGASRNTSTAQTANVECTTSSFQE
VNKYVAPASNVGEGSSTGLLHESNLQSWYNPHAMTSTSKLDSQSFPTNAFNGNMTSTSTL
DSRSFSTNNFNGNFTLSNVMGNSQMQQLQPGSSQNQFSMSPGFARGQVGNFSVQPMGQHF
QACNQFLRNNNTASYNLPAFGANTWLRPMPSLSPSYPSASMCFPTLKEIQDYVQTWEGTL
AGKITSSRITILRAKAFRKSSTPPTLTLDWPGRLEISNYLPQKALLHTRRFSQPIHYLFF
HVAKYSNVDLYNHCKTRNNCAKVDLQFQTIILSPTEREPLFVGTVFPGGTIFIEQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaagaggtggttaaacatagtagttgatggcaacaaagctttggagaaatat
tggaccgacattctttcaaactatcttgaaaaaattgtcaggtgctttgttggtgaaagc
caagagcaggaaagttatcttggtctagtactttataatgcaaactctgaactagtggaa
gcaggctatgacatgcaatttataaactggactaaagatgtgaataaatttatggaaaat
ttgtcacatttatctttcaatggaaatgatgcaaatcaatctaccatggcagaaggctta
gcagaagctctagtgatgtatccaaagccatgtgatacaatgacagaaagagaatactat
atttcagaaagacattgtattctagttgctccaggtgatcctgctcctaagagtatgtta
gtgtgtctgccaatgattcaaagagctcaagttattggtcaaagattaaaggcttgtcag
gccgattttctcgaggtcgccaaaacatgtatcccgctatctgtttccctatcagtgata
actcctaatccagttccaatttttggagccatatttaatatgggaaacaatgcattaaca
ttgtcaaatgctccaatctcaagttacagcactggccaattgactgttttactgtcaaaa
aacttcagagaggcacacgttgcactgaaagaaaaaggaataatggaatatccttcaaca
acaagtgtaggatcaatcagtgcagcacctgatacaacacttttcagagctttctctacc
aatcttcaagaagaacaagtctcctcctccatggcaataggggacacaatacgtgaaact
gacaatactataacaccggagcctgtaagcacctcgcagcataattctcaagagaacatt
gttcaaatgaatctatacgaagatatcatgtccgagcttgacgacgatgatctttttaca
ccgaataaaagatcaaaaacatttgcaccactagaggatgaccctgatctgcaagatttt
ttcaaatttgatcaaaacccttttgaaggttttgaccaattcatcaaacaagatcaacaa
gtattcaaccaacaagagattccgacggaagaagctgtattcaaccaacaacagattccg
acggaagaagctggagtagattttgcaaatgagctgcaagaaattctgaatggtgcttca
aggaatacatcaacagctcaaactgccaatgttgaatgtaccacaagttcatttcaggaa
gtaaacaaatatgttgctcctgcttcaaatgtcggagaagggtcttcgacaggactactt
catgaaagcaatttgcaatcatggtataatcctcatgccatgacgagcacatcaaaattg
gattctcagagtttcccaactaatgctttcaatgggaatatgaccagcacatcaacattg
gattctcgtagtttctcaactaataatttcaatgggaattttacattgtctaatgtaatg
ggcaactctcagatgcagcaacttcaaccaggctcatcacaaaaccagttttccatgtct
cctggttttgctagaggacaagtgggcaacttctcggttcagcctatgggacaacatttt
caggcctgcaatcagttcctgaggaataataacacggcatcgtataatcttcctgcattt
ggagcaaacacttggcttcgtccgatgccaagcttgtctccctcgtatccgagtgcgagc
atgtgtttccctaccctcaaagaaatacaagactatgttcagacgtgggagggcacatta
gcaggaaaaattacgtcgagtcgcataaccatcctgagagcaaaggctttcaggaaatca
agtacgccaccaacgcttacacttgactggcctggtaggttggagattagcaactatcta
cctcaaaaggctctcctccataccaggagattttcccagccaatacattatcttttcttt
catgtggctaagtacagcaatgtagatctatacaatcactgtaaaaccagaaataattgt
gcaaaagtagatctacagttccaaacaataatattgtctccaactgaaagggaaccactc
tttgttggaacagttttccctgggggaacgatatttatagaacaagcataa
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