Medicago truncatula (barrel medic): 25479419
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Entry
25479419 CDS
T01716
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
25479419
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
25479419
Meiosis-specific proteins
Cohesin complex and associated proteins
25479419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
Laminin_I
Med9
AAA
ABC_tran
AAA_27
DUF1664
Motif
Other DBs
NCBI-GeneID:
25479419
NCBI-ProteinID:
XP_013443636
UniProt:
A0A072TKD3
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Position
4:complement(16295158..16299048)
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AA seq
1208 aa
AA seq
DB search
MSLGKIHRLEIENFKSYKGSQIIGPFAGFTAIIGPNGAGKSNLMDAICFVLGVRTFHLRG
SQLTDLIYDDSEKQKNERSALVRLIYQLADKSEIQFARTITATGASQYFIDDNVVTWDVY
NAKLISLDILVKARNFLVFQGYVESIASKNPKELTLLFEQISGSDQFKREYDKLEDEKNS
AEEKMALVYQKKKTILMEKKKKKEQKKKAEEHLRLQDELKSKKEEHFLWKLFNIENDFAK
TTEELEVDKTSCEGVGKEVEKFEHEANEKEKELANCVEEIKLLEEKITEISNKLDDKTRP
DVIKLKEKISRINLKIEKVKKELCKKGEERKRHANDIAMLKRSIWDLEAKKDDLQEKGRN
VGGQIKLDGNDLEEYSRIKEEVRIKTANLREKKELLDGQQRGDSEAQTNLEETLQQLKNR
ESELDSKEKQMRERLDNFAKNKDDLENTKRELCLLQEKQSDFKREYHNLKKKIGDVVNEL
HELKSDRYENERDAKFADTVATLKRLFQGVHGRMTDICRPTQKKYNLAVTVAMGKLMDAI
VVEDENTAKECIRHLKELRFPPQTFIPLQSIRVNLIIERLRSLGGTTKLVFDVIQFDPSL
ERAILFAVGNTLVCEDLEEAKILSWTGERLKVVTVDGILLTKSGTMTGGTSGGMEARSKK
WDAKKFEESSQKKEKYESKLEELGSIRDMHHIKVSEVEEKISELKKKAQYAEIEKQCIEK
KLPTLSDEKGTIKKQIERVSPELIKLRAAVEKRNAEIRELEKSINEITDEIYKDFSKSVG
VANIREYEETQLKASQNAAEERLNLSSQLSKLKYQLEYEQNRDMSSRIQELESSLSALKN
DLKGLQNKEAEAKLAAENANKEISQLKGEYEKWKSKSEDCEKEIQELKKRASAAKTNLSK
LNHQIKSKEEQIEKLMGKKQEIQEKCKLEQINLPIISDPMDTDSSTGPVFDFDELSRTLR
NRRHCDRDKIEVEYKKNMDALMSKIESTAPNLKALKQYDALDEKERLITEEFEAVMKEEK
ERTDSFNAIKQERYNLFMGAFNRISGNIDKIYKQLTKSNTHLFGGTAYLYLENEDDPFQH
GIKYTAMPPTKAFFDMDQLSGGEKTISALALIFSIHSYKPSPFFILDEVDAALDNLNVAK
VASFIRSKSCEGARANQDTNDGKGFQIIQISQKNHFYDKAEVLVGVCRDSKSGSSRTLSL
DLTKYRES
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggggaaaattcaccgtctggagatagagaatttcaagtcatacaaaggttcc
caaatcatcggtcccttcgccggcttcacagccatcatcggccctaatggcgccggtaaa
tcaaacctaatggacgctatctgcttcgttcttggcgttagaacctttcacctccgtggt
tctcaactaacggatcttatctacgatgacagcgagaaacagaagaacgaacgttctgcc
ttagttcgattgatttatcaactcgcagacaaatctgagattcaatttgcaagaaccatc
actgccacaggcgcaagtcagtactttatcgacgacaatgtggttacctgggatgtctac
aatgctaaactcatatcccttgacattcttgtcaaagctcggaatttcttggtctttcag
ggttatgtggaatccatagcatcgaaaaatccaaaggaacttactttactcttcgaacag
atatctggctcggatcaattcaagagagagtacgacaagttggaagatgaaaaaaattct
gcagaggagaaaatggcgcttgtttatcagaagaaaaagactattttgatggagaaaaag
aagaagaaagaacaaaagaaaaaggcagaggaacatcttcggttgcaagacgaattgaaa
tctaagaaagaggaacatttcttgtggaagttgttcaatatagagaatgattttgctaaa
accactgaggaacttgaagttgataaaacaagttgtgaaggtgttggtaaagaggtagaa
aaatttgaacatgaagccaatgaaaaggaaaaagagctagccaattgtgttgaagagatt
aagctacttgaggagaaaataactgagataagcaacaaacttgatgacaagactcgaccc
gatgttatcaagttaaaggagaaaatatctcgtatcaatttgaaaattgaaaaggtgaag
aaggagctctgcaaaaaaggtgaagaacgaaagaggcatgctaatgatatagcaatgtta
aagagaagtatctgggatcttgaggcgaaaaaggatgacctacaggaaaagggtcgaaat
gttggtggtcagattaagttagatggcaatgacttggaagaatatagtagaataaaagag
gaagttaggataaaaactgcaaatcttagagagaaaaaagaacttcttgatgggcagcaa
cgtggtgatagtgaagctcaaactaatttggaagaaactcttcaacaattaaaaaaccgg
gagtcggagctggattcaaaggaaaaacagatgcgagaaaggcttgataattttgcaaag
aataaggatgacctggaaaacacgaagagagagctgtgtctgttgcaggaaaagcaaagt
gatttcaagcgagaatatcataacttgaagaaaaaaattggtgatgtagtaaatgaacta
cacgaattaaaatctgatagatatgaaaacgagagagatgctaagtttgctgatactgtg
gcgactctaaaacgcttgtttcaaggagtccatggtcgcatgactgatatttgtagacca
acacagaagaagtataatctagccgttaccgttgcaatgggtaaattaatggatgcaatt
gttgttgaggatgaaaataccgcgaaggaatgcatcagacatttaaaagagctgcggttt
cctccccagacatttattcctttacagtctattcgtgtgaatctaataatcgaaagatta
cgctcgttagggggtaccacaaaactggtttttgatgtgattcagtttgatccttccttg
gagagggcaattctctttgctgttgggaacactcttgtttgtgaagatcttgaggaggcc
aaaattttaagctggactggtgagaggttaaaagttgtgactgtggacggaattcttctg
acaaaatctggcacaatgactggtggcactagtggtggaatggaagcaaggtcaaaaaag
tgggatgccaagaaatttgaagaatcttcccagaagaaagagaagtatgaatcgaagttg
gaagagctaggatcaattagagatatgcatcatattaaagtgtctgaagtagaggaaaaa
attagcgaactcaagaagaaagctcaatatgctgagattgaaaagcaatgcattgaaaag
aagcttccaacattgagcgatgaaaaggggactatcaaaaaacaaattgaacgagttagt
ccagaactgatcaagttaagagctgctgttgaaaagagaaatgcagaaatacgcgagctt
gagaagagtataaatgaaatcaccgatgagatatacaaagacttcagcaagtcagttggg
gttgcaaacattcgcgagtatgaagaaactcaactcaaggcttctcaaaatgcagcagag
gagagactgaacctgagtagccaactttcaaaattaaaatatcagttggagtatgagcaa
aatcgggacatgagttctcgaattcaagaattggaatcttcactgagtgctttaaagaat
gatttaaaggggctacagaacaaagaggccgaagcaaagttagcagcggagaatgctaat
aaagagatcagtcagttgaagggtgaatatgaaaagtggaaatccaagtcagaggattgt
gaaaaggaaattcaggaactgaagaagagggcttctgcagccaaaacaaacttatccaaa
cttaatcatcagattaagtcaaaggaggaacagattgagaagttaatggggaaaaagcag
gaaatacaagaaaagtgtaagctggagcagattaaccttccaatcatatcagatcctatg
gataccgatagctcaacaggtccagtttttgactttgatgagctcagtaggacactgaga
aataggagacactgtgacagggataaaatagaggtagaatacaagaaaaacatggatgcg
ttgatgtctaagatcgaaagtacagcgccaaatttgaaggcattgaaacagtatgatgcc
ctggatgaaaaagaaagacttataactgaagagtttgaggctgtcatgaaagaagagaag
gaaagaacagatagtttcaatgcgattaagcaggagagatataatttgttcatgggtgct
ttcaaccgtatatctggtaacatagataaaatctacaaacaacttacaaagagcaacaca
catctttttggtggaacagcatacctatatttggaaaatgaagacgatccatttcaacat
ggcatcaagtacactgccatgcctcccacaaaggcattcttcgatatggatcaactttct
ggtggcgaaaagacgatttctgcgcttgcgttgatattctccattcatagttataagcct
tcaccatttttcatacttgatgaagttgatgctgcattggacaacttgaatgttgcgaaa
gttgctagctttattcgttcaaaatcttgtgaaggagcgagggctaatcaagataccaat
gatggaaagggttttcagataattcaaatatcacagaaaaatcacttctatgacaaagct
gaagtgttagtcggggtttgcagagactctaaaagtggcagttcgagaactctctcgctt
gatctcactaaataccgggagtcctaa
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