Medicago truncatula (barrel medic): 25480600
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Entry
25480600 CDS
T01716
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
mtr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25480600
03460 Fanconi anemia pathway
25480600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25480600
03036 Chromosome and associated proteins [BR:
mtr03036
]
25480600
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25480600
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
25480600
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
25480600
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
25480600
FA (Fanconi anemia) pathway
Downstream FA components
25480600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
BRCA2DBD_OB2
Motif
Other DBs
NCBI-GeneID:
25480600
NCBI-ProteinID:
XP_039690119
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Position
5:complement(23720397..23729129)
Genome browser
AA seq
875 aa
AA seq
DB search
MSMWEIFSDADADDNRYKWRQINTTSNHVMKPLAPQDEENMIDDSFGFSNSLFKTASGRK
VTLSSNGLVRAKTLLGLGLQEEIIDSNNHTPKNAKNFHGFDEESPPLVSKSKNGFENKIV
QIESGSGSKKAPIKFQTPQSARSFNAFEEESPHLQCMKSCKMTSAASFQSPLVGRSNSGF
ENIIVQPDSDSGAKQAQFKFQTAAGRSLSISSDALKRARSLLGDPDLGDFFEGEDSLFLS
LDMRQISKITSSVGHQKTPESNKNHVTKSFTYPLQPSKQTEFSNKLLGHEGNGNNLIMKF
DDVANESDYGCKSSNTLEVVDLTRKSSSLGTTFFDVSSTTKTTPTFNKQPAIGKRRLGLT
ANVSSFKKPRISKTSASGDQHVQNFHNGLSKLSSGASGCKRKVSTRYPSRNARIHIKEFF
AVPPLMKKVHFPNPVRQVTSGNAGEYIFHDGSDDNGIGGEAFIHLLAQHGASLHFASKEW
VLNHYKWIVWKLACYERYYPARCAGKFLTVSNVLEELKYRYEREVNHGHRSIIKKVLEGD
ILPSSMMILCISSIHSNHVMESGTLFQAQTGNKSREAVKVELTDGWYSINAILDAPLSKQ
LDAGRLFVGQKLRIWGAELCGWNGPVSPFEVSSTISLFLHINGTYRVHWSARLGFCKVAG
PPLAFKCIKNNGGLIPQTLAGITHIYPILYKERCSAVVDNIVSEYQKERTSSHVYDHDDS
EGAKIYMMLETAAEPEFLMADMTLEQLRSFAAYKAKLNATRQSQLESSIEKALKDSGLGN
RDVTPFMKLRVVGLTYKNRQDKPKEGIITIWNPTQKQCQELAEGEAYAIAGLTPYGSDPD
VLHLQTRGSTTKWLPLSSNAKEQFRSFFNSRKSIP
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtgggagatattctccgatgcggatgccgacgataaccgttacaaatggcgg
caaatcaacaccacttcgaatcatgttatgaaacctttagcccctcaagatgaagaaaac
atgatagatgatagttttggattctcaaattctcttttcaagacagcttcaggaagaaaa
gttactctatcttctaatggtcttgttagagcaaagacgttactaggattgggattgcaa
gaagaaatcattgatagtaataatcatacccctaagaatgccaagaattttcatggtttt
gatgaagaatcacctcctttagttagcaaatcgaagaatggttttgagaataaaattgtg
cagatagagagtggtagtggttctaagaaagctccgattaaatttcaaactcctcagagt
gcaagaagttttaatgcttttgaagaagaatcaccccatttacagtgtatgaaaagttgt
aaaatgacgagtgccgcgtcatttcaaagtcctttagttggtagatcgaatagtggtttt
gagaatataattgtgcaaccagatagtgatagtggtgctaagcaagctcaatttaaattc
caaactgcagcggggaggtcattatccatttccagtgatgccttgaaacgcgctaggagc
cttcttggtgaccctgatttgggagatttctttgagggagaggattcacttttcttgtct
ttggatatgagacaaattagcaaaatcacatcctctgttggtcatcaaaagacaccagaa
agcaataaaaatcacgtgacaaaaagtttcacataccctttgcagccttccaaacaaaca
gaattttcaaataagttgcttggccatgaaggtaatgggaataatttaatcatgaaattt
gatgatgttgcgaatgaaagtgattatggctgtaaaagtagcaacactcttgaagttgtt
gacttgacaagaaaaagttcttcattgggtacgacattttttgatgtttccagtactacc
aagacaactcctacatttaataaacaacctgctattgggaaaaggagactaggattaact
gcaaatgtttcttctttcaaaaagcctcgcatttccaaaacttctgcctctggtgaccaa
catgtccaaaactttcataatggtttgtctaaattatcatctggtgcttctggatgcaaa
agaaaggtttccacccgatatccatctcggaatgcaaggatacacatcaaagaatttttt
gcagttcctccattaatgaaaaaagtgcattttccgaacccggtcagacaggtgacatct
ggtaatgcaggagagtacatattccatgatggctccgatgataatggtattggaggagaa
gctttcatccatctattggcacaacatggggcttccctgcattttgcttcaaaagagtgg
gtattgaatcattacaagtggattgtatggaaactggcatgctatgagagatactatcca
gctaggtgtgcgggaaaatttctgactgtatcaaatgtgcttgaggaactgaagtacaga
tatgaaagagaagtgaatcatggccaccggtctatcatcaagaaagttcttgaaggggat
atattgccttcttcaatgatgatcctttgcatatctagcattcactcaaatcatgtgatg
gaaagtgggacattatttcaggcacaaaccgggaataagagcagggaggcagtaaaagtt
gaactaactgatggatggtattctataaatgccattttagatgctccattgtcaaagcaa
ctggatgctggaagattatttgtaggacagaagcttcggatctggggagcagaattatgt
ggctggaacgggccagtttcaccctttgaggtgtcatcaacaattagcttatttcttcac
ataaatggaacatatagagttcattggtcagcgcggttaggattttgtaaagttgccggt
ccgcctttggctttcaaatgcataaaaaacaatggaggtttaatacctcagaccttggca
ggaattacccatatatatcccattctttacaaagaaagatgctcagctgttgtggataac
attgtttcggagtatcagaaggaaagaacgagttcacatgtttatgatcacgatgatagt
gaaggggctaagatttatatgatgttggagacagctgcagaacctgaattcttgatggcg
gatatgactctcgagcagcttcgttcttttgctgcgtataaggccaaattaaatgcaact
agacaatcacaattggaaagttcgattgagaaagctttgaaagattctggcttgggaaac
cgagatgtgacgccatttatgaaattgcgggtcgttggattaacttacaaaaatcgacaa
gataagcctaaggaaggcataataacaatctggaacccaacacagaagcagtgtcaggag
ctggcagagggagaagcatatgcaattgcaggactcacaccatatggatctgatccggat
gtccttcatttgcagactagaggatctactaccaagtggttgccattatcttctaacgca
aaggaacagtttaggtcatttttcaatagtcggaaatcaatcccatag
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