Medicago truncatula (barrel medic): 25481894
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Entry
25481894 CDS
T01716
Name
(RefSeq) ribosomal RNA small subunit methyltransferase H isoform X1
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25481894
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
25481894
Ribosome biogenesis [BR:
mtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
25481894
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Motif
Other DBs
NCBI-GeneID:
25481894
NCBI-ProteinID:
XP_013465755
UniProt:
A0A072VDX8
LinkDB
All DBs
Position
1:1773754..1777586
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AA seq
417 aa
AA seq
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MATISKISSLLFSSSKPKLIHHILSPSSNLRTLTTASSRITKTKKTEAALAKEKRRTRSD
KELDQETIIELYNNNSHLHVPVMLSQVLDVFSNCSLTSFVDCTLGAAGHSTNVIRGHPEL
KYFVGMDVDPVGRDTAQSRISSVLDDRESSVKVFTVLRNFRHIKSVLRGTGEEHLGAASI
DGILMDLGMSSMQVDDPQRGFSVLGDGPLDMRMDPQASLKAEDILNSWPDTEVGRILRDY
GEESNWRTLQKKIVLARLEGGLHSTTDLLDLIQRVTPGMKGGRQGWIKTATRVFQALRIA
VNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLNIIKGNEDMGEGESCNS
DLRKMIDEIKEKEAWIRQVMPGSNGIILTKRPITPSEDEENLNRRSRSAKLRVIQKL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatttctaagatatcgtcactgttattctcttcatccaaacctaaactcatt
caccacatcctctctccttcttctaatctcagaaccctcaccactgcttcttccagaatc
acaaagaccaagaaaacagaagcagcacttgccaaggaaaagagaagaacgcgttctgac
aaagaactcgaccaggagacaattattgagctttacaacaataactctcatcttcatgtt
cctgttatgctttctcaagtcttagatgttttctcaaattgttccttaacttcttttgtt
gattgtactcttggtgctgctggtcactctacaaatgtgattagaggtcatccggagttg
aagtattttgttgggatggatgtggaccctgtggggcgtgacacggctcaatcccgcatc
agttcagttttggacgatagggagtctagtgtgaaagtgtttactgtgttaaggaatttt
aggcacatcaaatctgtgcttagaggaacgggcgaggagcacttaggggctgcgtctatt
gatggcatcttgatggacctgggcatgtcatctatgcaggtggatgatcctcaaagaggg
ttcagtgtgcttggtgatggaccccttgatatgcgcatggatcctcaggcaagccttaaa
gcagaagacatattaaattcttggccagatactgaagtgggccgtatcctaagggattat
ggggaagagagtaattggcgtactctgcagaagaaaattgtcctagcccgtttagaaggt
ggattacattccactaccgacttgctggatctcattcagcgtgtgactcctggaatgaaa
ggggggagacaaggttggataaaaacagcaacccgggtatttcaagcattgagaatcgct
gtcaatgatgaactgaagactcttgaggattctctctattcttgttttgactgtcttgca
cctggtggaaggcttgctgtcatatcctttcacagtttggaggacagaattgtgaagcag
acatttcttaatataattaaaggaaatgaagacatgggagaaggggagagttgcaatagt
gatcttaggaagatgattgatgaaatcaaagaaaaagaagcttggataagacaagtaatg
cctggatcaaatggaattattctcacaaaaagaccaatcacgccatcagaagatgaagag
aacttgaaccgcagaagtagaagtgcaaagctcagggttattcaaaagctttga
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