Medicago truncatula (barrel medic): 25482039
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Entry
25482039 CDS
T01716
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
25482039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25482039
03110 Chaperones and folding catalysts [BR:
mtr03110
]
25482039
03029 Mitochondrial biogenesis [BR:
mtr03029
]
25482039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
25482039
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
25482039
Messenger RNA biogenesis [BR:
mtr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
25482039
Chaperones and folding catalysts [BR:
mtr03110
]
Heat shock proteins
HSP60 / Chaperonin
25482039
Mitochondrial biogenesis [BR:
mtr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
25482039
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
25482039
Exosomal proteins of other body fluids (saliva and urine)
25482039
Exosomal proteins of breast cancer cells
25482039
Exosomal proteins of colorectal cancer cells
25482039
Exosomal proteins of bladder cancer cells
25482039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
25482039
NCBI-ProteinID:
XP_013465955
UniProt:
A0A072VEG8
LinkDB
All DBs
Position
1:4887787..4893497
Genome browser
AA seq
591 aa
AA seq
DB search
MASLNLSSCNLSSSASISSFPSSSRRKTTSNVALTRKNRNPKVSAMAKELYFNKDGSAIK
KLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREVELEDPVENIGAKLV
RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVAELKLM
SKEVEDSELADVAAVSAGNNHEVGNMIAEALSKVGRKGVVTLEEGRSAENNLYVVEGMQF
DRGYISPYFVTDSEKMTVEFENCKLLLVDKKISNARDLINILEDAIRNGFPILIIAEDIE
QEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKAGNE
VLGTAAKVVLTKDTTTIVGDGSTQEAVTKRVSQIKNQIEAAEQDYEKEKLNERIAKLSGG
VAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKATLAN
DEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDDTRYGYNAATGKYEDLMSAG
IIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEVAPVGNPMDNSGFGM
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcattaaatctatcctcatgcaacctctcttcctccgcttccatttcttcattc
ccatcttcttcccgcagaaaaactaccagcaacgtcgctctaaccaggaagaatcggaac
cctaaagtctcagccatggccaaggagttgtattttaacaaagatggttccgctatcaag
aaactccaaaatggtgtgaacaagcttgcggatttggttggtgttacccttggtcctaag
ggaaggaatgttgttcttgagagcaagtatggttctcctaagattgttaatgatggtgtc
actgttgctagagaggtggagttggaggatccggttgagaatattggtgctaaattggtg
agacaggcggctgccaagacaaatgacttggctggcgatggaactactacctctgttgtt
ttggctcaaggtcttattgcagaaggtgttaaggttgttgcagctggtgcaaaccctgtg
cttatcacacgtggtattgagaagacagcgaaagctcttgttgctgaacttaaactaatg
tcaaaagaggttgaggatagtgaattggctgatgtggcagcagttagtgcagggaacaat
catgaggtaggaaatatgatagctgaggcgttgagtaaggttggtagaaagggtgtcgtg
acacttgaggagggaaggagtgctgaaaacaatctgtatgttgttgagggtatgcaattt
gatcgaggatatatttcaccctactttgttactgacagtgagaaaatgactgttgaattt
gagaactgcaagttgcttttagttgacaaaaagatatccaatgcaagggatcttattaac
atactagaggacgcaattagaaacggattccctattttgatcattgcagaggatattgaa
caagaagctttggcaactcttgttgtgaacaaacttagaggatcactgaagattgcagca
cttaaggctcctggatttggagaacgcaagagccaataccttgatgatattgccatcttg
acaggaggtactgttatcagagaggaggttggccttagcttagacaaagctgggaatgag
gttctaggcactgcggccaaggtggtgctcaccaaagatacaaccacaatagtaggtgat
ggaagtacccaagaagcagttaccaagcgagtttcacaaattaagaaccaaattgaggct
gcagaacaagactatgaaaaggagaagctgaacgaaaggattgcaaaactgtctggtggt
gtggctgtaattcaggttggtgcacaaactgagacagaactcaaggaaaagaaattgaga
gttgaggacgctctaaatgccacaaaggcagctgttgaagagggtattgtagttggcggt
gggtgcactttgctcagacttgcatcaaaggtggatgcaatcaaggccacccttgcaaat
gatgaagaaaaagttggagcagacattgttaaaagagctcttagttaccctctgaaatta
atagcaaaaaacgctggtgtaaatggcagtgttgttagtgagaaggttctatccaacgac
gatacgagatacggatataatgctgccactggaaaatatgaagatttaatgtcggctggg
atcattgatccaacaaaggtggtcagatgttgcttggaacatgcagcctctgttgcgaaa
acattcttaatgtcagactgtgttgttgttgagataaaggaacccgaagttgcacctgtt
ggtaacccaatggacaattcaggattcggtatgtag
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