Medicago truncatula (barrel medic): 25482524
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Entry
25482524 CDS
T01716
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
25482524
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
25482524
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
25482524
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_11
MTS
Motif
Other DBs
NCBI-GeneID:
25482524
NCBI-ProteinID:
XP_013466555
UniProt:
A0A072VG62
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Position
1:complement(11496785..11500702)
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AA seq
458 aa
AA seq
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METKRCSFWLPNKNRFCANTLLSGSLFCGNHNSRAEGEWIQCPIDPSHSVLEQNLNWHVK
RCPLLKQVQSLSDQPFYKKGINAGSDGEQQEEETSGFNDSKLTTMTVSSEMKRNALHGMS
VPKFCNLIEKIESVHESLCKDIQDSFQMPEVCRLWIKSKEEERKLPFQEKHIMQQASIVG
NLENFAVLKNSLESKPSKCGESNEGKEDGVSTVIEFGAGRGYLTQMLADCYGINRVFLVE
RKAYKLKADRSLRQNENLTLERLRIDIEDLNLNAVESLQGVPFLATGKHLCGAATDLTLR
CCFPEYRKDSSEQNITNINFEGLAIATCCHHLCQWKHYTNKKFFLDLGMTKGEFHAITWF
TSWAVDANHDSDLPDTTNCISHFQSIKEQGNEYSDGVEKILSEMEATKRAALGFKCKWII
DIGRLMWLRELGLDAKLVRYVPPSISPENHLLLAKPLN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggagactaagcgctgcagtttctggcttcctaacaaaaacagattttgtgcaaacacc
cttctcagtggttccttattctgtggtaatcataactcaagggccgaaggcgagtggatt
caatgccccatagatccatcacattcggtgctcgagcaaaatctaaattggcatgttaag
cggtgcccattgctgaaacaggttcaatccctgtccgatcaacctttctataaaaaaggt
atcaatgctggttctgatggagaacaacaagaggaggaaacttcagggtttaatgattca
aaattgactactatgaccgtttcttcagaaatgaagaggaatgctcttcatgggatgagt
gtgcccaaattctgcaatttaattgagaagattgaatctgttcatgaatccttgtgtaaa
gatattcaggactcgtttcagatgccggaagtttgcagactttggattaaaagcaaagaa
gaagaaaggaaattgccatttcaggagaaacatataatgcaacaggcatcgattgtggga
aatttggaaaattttgctgtattgaagaattctcttgaaagtaaaccatcaaaatgcggg
gaatcaaatgaggggaaggaggacggggtctctacagtcattgagtttggagctggtaga
ggatatttaacacaaatgcttgcagattgctatggaatcaacagagtcttcctcgtcgag
cgaaaggcatacaagttgaaggctgatcgatccttgcgacagaatgagaatttgacgtta
gagcgtttgagaattgacattgaagatttaaatttgaatgctgttgagtctttgcaagga
gttccatttctggccactggtaaacacttatgtggagctgcaacagatttgactttgaga
tgctgctttcctgaatatagaaaagatagtagtgaacagaacattactaatattaatttt
gaaggtttagctatagcaacatgttgtcaccatctttgccagtggaagcactatacaaat
aagaagtttttcttagatttgggaatgacaaagggagaatttcatgccattacatggttt
accagctgggcagtagatgctaatcatgattcagatcttcctgatactactaattgtata
tcgcattttcaatcaataaaggagcaaggtaatgagtattcggatggagttgaaaaaatt
ctttcagaaatggaagcaacaaaacgagcagcactgggatttaagtgcaagtggattatt
gacatagggaggttgatgtggttaagagaacttggattagatgcaaagcttgtcagatat
gttccaccaagcatttctcctgaaaatcatttactattagctaaacctttgaattga
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