KEGG   Medicago truncatula (barrel medic): 25482929
Entry
25482929          CDS       T01716                                 
Name
(RefSeq) cullin-3A-like
  KO
K03869  cullin 3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    25482929
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mtr04121]
    25482929
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25482929
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     25482929
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     25482929
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 25482929
NCBI-ProteinID: XP_039689028
LinkDB
Position
1:complement(15574759..15577538)
AA seq 739 aa
MSNKKKKNNMKKKKDVPIEAFKDMSAEYGDKAWNILEHAIRRIYNHNARNILSFEELYRN
ACNMIFHGFGEKLYSGLVATMTSHLKEMATSVAATQRSSFLKELNRKWNDHSKALRKIRD
ILMYMDTTYIPKTNKTPVYELGLSLWRENVIYSNQIRIRLSNMLLVLVCKDYAGEVIDRK
LIRYITNMLMDLGPSVYMQEFENPLLQVSDEFYRAESQKLIECCNCGEYLKKAEMRLNEV
IDKVSHFLDPSTQKKITIVVEKEMIENHMLRLIHMENSGLVNMICDDKYEDLSRMYNLFR
RVNGGISQIREVMNSYIRDYGKQLVTDPERLKNPVKFVQRLLDEKDKFNRIINLAFSNDK
LFQKDLNSSFEFFINLNPRSPEYISLFVDDKLQNGLKGISEDVVEITLNKVMVLFRYLQE
KDVFEKYYKQHLAKRLLCGKTVSDDAERSLIAKMKTECGYQFTSKLEGMFTDMKTSLDPI
KSFYACHPELGDADGATLTVQVLTTGSWPTQSSVTCNIPTEMVELCEKFLLYYLSNHTDR
KLSWQTNMGTADLRATFENGQKHELNVSTYQMCVLMLFNNADRLSYKEIEQATEIPASDL
KMCLQSLALVKGKDVLRKEPMNNYVSEIDAFFVNDKFSSKLYKVKIGSVVAETEPEPEKL
KTQERVEEERRPQIQASIVRIMKSRKKLEHNNLVAEVTKQLQSRFLANPTEVKKRIESLI
EREFLERDNSDRKLYRYLA
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgagtaacaagaagaagaagaataacatgaagaagaagaaggatgttccgatagaggct
ttcaaggacatgagtgctgaatatggtgacaaggcttggaacattctggaacatgcaatt
cgtcggatatacaatcacaacgctaggaatattctcagttttgaagagctttacagaaat
gcttgcaatatgatttttcacggttttggggagaagctatactctggactggttgccacc
atgacttctcatctcaaagagatggctacatctgttgcagccactcaaagaagttccttt
ctgaaagaattaaacagaaaatggaatgatcacagcaaggcattacgaaagattagagac
attttaatgtacatggatacgacttatatcccaaagaccaacaagacacctgtttatgaa
cttggtctgagcctgtggagagaaaatgttatttattcaaaccagataaggattcgattg
tcgaatatgcttttggtattagtatgcaaggactatgctggagaagttattgatagaaaa
ctgattagatatataacaaatatgctaatggatttaggtccttccgtttatatgcaagaa
tttgagaatcctttgctgcaagtttcagatgagttctaccgggctgaatcacagaaattg
attgagtgctgtaattgtggggagtatctcaagaaggctgagatgcgcctgaatgaggta
attgataaagtgagccacttcttggaccctagcactcaaaagaagattactattgtggtg
gagaaggagatgatcgaaaatcacatgcttagattaatccatatggagaactctgggtta
gtaaacatgatttgtgatgataagtatgaagatttgagtagaatgtataacttgttccgt
cgtgtcaacggtggtatctcacaaatacgggaagtgatgaattcatacattagagactac
ggtaagcagcttgttactgatccagaaaggttgaagaatccggttaaatttgtgcagagg
ctcttagatgagaaagataaattcaacaggattataaatttggcatttagtaatgacaag
ttgttccaaaaagatctgaattcctcatttgaatttttcattaacttgaatcctcgttct
ccagagtacatatcactatttgtagacgataagcttcaaaatggtctaaagggaattagt
gaggatgttgtagagattactcttaacaaggttatggttttattccgttatttgcaggaa
aaagatgtgtttgagaagtattacaaacagcaccttgcaaagcggcttttgtgtggaaaa
acagtttctgatgatgccgagcggagtctcatagctaagatgaagacagaatgtggatac
caatttacttccaaattagagggcatgtttaccgacatgaaaacatctctagacccgata
aagagcttttatgcctgccaccctgagttaggtgatgccgatggtgctacacttactgtg
caggtcctgacaacagggtcttggccaactcaatctagtgtaacatgtaacattccgact
gaaatggtagaactttgcgagaaatttctgttatattacctcagcaaccataccgacagg
aaattgtcgtggcaaactaatatgggcacagcagacttaagagcaacttttgagaatggt
cagaaacatgagttaaatgtttctacctatcaaatgtgtgtactcatgctatttaataat
gctgatagattaagctacaaggaaattgagcaagcaactgagattccagcttcagatttg
aagatgtgcctgcaatctttggctttggttaagggtaaagatgtcctacggaaggagcct
atgaataattatgttagtgagattgatgcattctttgttaatgacaagttcagtagcaaa
ttgtataaggtaaaaataggaagtgtagttgctgaaacggaacctgaaccggagaaactg
aaaactcaagaaagagttgaggaggagcggaggccgcagattcaggcttcaatagtgagg
attatgaaatcaaggaagaaactggaacacaataatcttgtagctgaagtaacaaagcag
ttgcagtctcgattccttgcaaatccaacggaggtaaagaaacggattgagtctctaatt
gagagggagtttttggagagagataacagtgacagaaaattgtatcgttatcttgcttag

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