KEGG   Medicago truncatula (barrel medic): 25483011
Entry
25483011          CDS       T01716                                 
Name
(RefSeq) DNA repair protein RAD5B
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25483011
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    25483011
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C zf-C3HC4_3 HIRAN zf-C3HC4 DEAD zf-RING_UBOX zf-RING_2 zf-C3HC4_2 ResIII zf-RING_5 zf-C3HC4_4 Prok-RING_4 RING_XB3-XBAT31 zf-RING_4 zf-ANAPC11 zf-RING_6
Other DBs
NCBI-GeneID: 25483011
NCBI-ProteinID: XP_013467105
UniProt: A0A072VHP2
LinkDB
Position
1:16913092..16919531
AA seq 1153 aa
MENDNVVFRNGNPVLVAQPLTVVRARTSTGGGARVLATPPNQNPNSDESDACKASIIKVK
DEPREFEDEAKSVTVAFQPPAAETVVECKTESDERRSMLAFDDFLKATNTKVASVDESLK
SMEAESTIQMKVESSDVDVVFETQESVKSMEEVPNLNVVCDTQESVMAEPVKVEPVKVGP
VKQPTLAEPVCAEKKTVCDDEVEVLKVVKGKEAVSDEVRVLKVVKKEVVEEKKIQIPNLE
DGEFPVEPGWSLLGRKIEIATSTAKGVRRLVDNEIIYFDFPNPHTSYKFQWIVRVSTKRS
GVVGRLPMEWAKSVIPLVQSGNVKVRGRCIATPYKLEMMQEIMLLVSFYVHHSVFSESVD
TSWRLEACGNVNSAAYPLLTLLNMLEIEPYRKADFTPEEMKARKRVLKLDSDEVSVIPVN
KRRKGVSEPLPATTEDEQALSESALNKLVGAAEVFDLEEKEAPKTLMCSLKPYQSQALYW
MTKIEKGGDDENAERNLHPCWSAYNICNGRSIYVNIFTGEAAKKFPQATQMARGGILADA
MGLGKTVMTIALILSNPGRLKSEDSDGESVYDNIFSAKRRNVDPSSNLEGGTLIVCPMAL
LGQWKDELETHSKPGSISIFVHYGGGRTSNPDLLLDYDVVLTTYGVLSASYKSERENSIY
HRVQWYRVVLDEAHHIKSHKSQVAEAAIALSSHCRWCLTGTPLQNSLEDLFSLLSFLRVQ
PWCSWQWWTKLVQKPYEQGDQRALKLVKGILRTLMLRRTKETKDKEGRPILVLPPTDIQL
IECEQSESERDFYDALFLRAKVQFEQYVAQGKVLNHYANILDLLMQLRRCCNHPFLVMSG
SDTAKYADLSRLARKFLESHTESSDMCCESDAPQNAELNKLASNFLQNSASTSNPIQSRG
YIDEVLGHIQKGESVECAICMESPDDPVFTPCAHQFCRECLFNCWGTSMGGKCPICRQIL
KKNDLIVLPSESPFKVDIENNLTESSKVSKLFDFLENSQKYSDEKSIVFSQWTSFFDLLE
NPLRRRGIGFLRFDGKLTQKQREKVLKEFNETKEKRVLLMSLKAGGVGLNLTAASNVFLM
DPWWNPAVEEQAIMRIHRIGQKRRVTVRRFIVKGTVEDRLQQVQAKKQKMISGALTDDEV
RTSRIQDLKMLFS
NT seq 3462 nt   +upstreamnt  +downstreamnt
atggaaaacgacaatgtcgtttttagaaacggaaaccccgttctcgtcgctcagcctctc
accgtcgtccgcgcccgaaccagcaccggcggcggcgctcgtgttcttgcaacgccgccg
aatcaaaaccctaactccgacgagtctgatgcatgcaaagcttcgatcatcaaagtcaaa
gacgaaccgcgcgaatttgaagatgaggcaaaatctgtcaccgtcgcttttcaacctccg
gcggcggagacggtggtggagtgtaagacggaatctgatgaacgacgttcgatgcttgcg
ttcgatgattttttgaaagctacgaacacgaaagttgcttctgttgatgaatcgttgaaa
tcaatggaagctgaatcaacgattcaaatgaaggtagaaagttctgatgttgatgtagtt
tttgagacgcaagaatcggtgaaatcaatggaagaagttcctaatctcaatgtggtttgc
gatacacaagaatcggttatggctgaaccggttaaggttgaaccggttaaggttggaccg
gttaaacaaccaacattggctgaaccggtttgtgcagagaagaaaaccgtttgtgatgat
gaagtggaagtgttgaaggtggtgaaggggaaagaagctgtgagtgatgaagttagggtt
ttgaaggtggtgaagaaggaggtagttgaagagaagaagatccagattccgaatcttgag
gatggtgagtttcctgttgagcctgggtggtcattgttgggaaggaagattgagattgct
acttctactgctaaaggagtgagaagattggtggataatgagattatttattttgatttt
ccgaatccgcatacgtcgtataagtttcaatggatcgttcgtgtctccacaaagcgttct
ggagtggttgggaggctgccaatggaatgggctaaatctgtgattccccttgtgcaatct
ggaaatgttaaggttcgaggacgatgcattgctacaccgtataagcttgaaatgatgcag
gaaataatgttgttagtgagtttttatgttcatcactctgtattttccgagtctgttgat
acctcttggagactagaggcttgtggtaatgttaactctgctgcatatccactgcttaca
ctgttaaatatgctagagattgagccatataggaaggctgatttcacccctgaggaaatg
aaggctcgaaagcgggtgcttaaacttgactcagatgaagtttcagtaattcctgtcaat
aagcgaagaaaaggtgtcagtgagccacttccagcaacaactgaggatgaacaagcactt
tcggagtcagctttgaacaaacttgttggagctgcagaagtctttgacctggaggagaag
gaagccccaaagacactgatgtgtagtctaaagccttaccagagtcaagctctgtattgg
atgacaaaaattgagaagggaggtgatgatgaaaatgctgagagaaatctacatccttgc
tggtcagcctacaatatatgcaatgggaggtcaatatacgtcaacatatttactggagag
gcagcaaagaaatttccacaagcaacacagatggcaagaggaggaattttggcagatgca
atgggacttggaaagaccgttatgacaattgcactgattcttagtaatccaggcaggttg
aagtcagaagacagtgatggagagagcgtatatgacaatattttttcagctaagaggaga
aatgttgacccatcgtctaatttagaaggtggcactttaattgtttgtcctatggcgttg
ttgggtcagtggaaggatgaacttgaaacgcactcaaaaccaggcagcatatccatattt
gttcattatggtgggggaagaaccagtaatcctgatttgctgttagactatgatgttgtc
ttgacaacttatggtgtcctatcagcttcttataaaagtgaaagagagaatagcatctac
cacagggtccaatggtacagagtggtactagacgaagctcatcatataaaatcccataaa
agccaggttgctgaggctgctattgctctatcgtcgcactgccgctggtgtctaactgga
acaccacttcagaatagcttggaagatctattcagtctcttgtctttcttgcgtgtgcaa
ccttggtgcagctggcagtggtggactaagttggttcaaaagccctatgagcagggtgat
caaagagccctaaaattggtcaagggaattttgaggacattgatgttaaggagaactaag
gaaacaaaggataaagaaggaaggcctatacttgtcctgccaccaactgatattcaattg
attgagtgtgagcagtcagaatctgaacgggacttctatgatgctctcttcctgagagct
aaagtccaatttgagcagtatgttgcacaaggaaaggttcttaaccactatgcaaatatc
cttgacttactaatgcagttgagacggtgctgcaaccatccgtttttggtcatgagtgga
agtgatactgccaagtatgcagacttgagcagacttgcaagaaaattcctcgagtctcat
actgaatcatctgatatgtgctgcgaaagtgatgcaccacaaaatgcagaattgaataaa
cttgctagtaatttcctacagaattctgcttctacttcaaaccctatccaatctcgtgga
tacatcgatgaggttttggggcatattcaaaagggtgaaagtgtcgaatgtgctatatgc
atggaatcaccagatgatcctgtttttacaccatgtgcacatcagttttgcagagaatgc
ctattcaattgttggggtacctcaatgggtggtaagtgcccaatctgccgtcaaatactc
aagaaaaatgatcttattgtacttccatcggaaagcccgttcaaggttgatattgagaat
aatttgacggagtcctcaaaggtttctaagctctttgatttcttagaaaatagtcagaaa
tattctgatgaaaaaagtattgtttttagtcaatggacttcattttttgatctgttggag
aatccattgaggaggagagggataggattcttaagatttgatggaaagttgactcagaag
cagagagaaaaagttctgaaagaatttaacgaaacaaaagagaaaagggttttgttgatg
tcactaaaagctggtggtgtaggcttgaacttgactgcagcctcaaatgttttcctaatg
gatccatggtggaatcctgcagttgaggagcaagcaataatgaggattcatcgtattggg
caaaagcgaagggttactgtaagaagattcattgtgaagggaacagtggaagatcggttg
caacaagtgcaagccaagaaacagaagatgatatctggtgctctcactgatgatgaagtt
cgaacttccaggattcaagacctcaaaatgcttttctcatga

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