Medicago truncatula (barrel medic): 25483310
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Entry
25483310 CDS
T01716
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
25483310
03036 Chromosome and associated proteins [BR:
mtr03036
]
25483310
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
25483310
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Topoisomerases
25483310
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
25483310
Centrosome formation proteins
Centriole proteins
25483310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Acylphosphatase
Motif
Other DBs
NCBI-GeneID:
25483310
NCBI-ProteinID:
XP_039691037
LinkDB
All DBs
Position
1:complement(21409050..21418715)
Genome browser
AA seq
1234 aa
AA seq
DB search
MEKRCEPDTFIDSIKRKRKIQKQWVYEDGKIVHRKISYVPGLYNIFDIILVHAADKKRRD
PSMNRLRVKIDTKMNEISVYHNGAPLIGDETFDDVINNFDLTNSYSTCFWVELADECGIS
RQEFSNNMDVKFERVVCKVDDYSTMVTFKPDLTKFEMTCLEEDVVALMKKRVLDMAGCLG
DTVTVELISEVIPFNSFKGYADFFLNCAQESTPFPLPRTHAKLSDSLEICLSLSDGKFQQ
VSFVNSIATIKGGTHVDYITKQITTYIKKEVLKMKEHVNVNADTVKNRLWVFVNARIDNP
TFHSQTKEMLTTKPARLGLNSRLTHGQKSEIAKTLLPRIRICLKRTHVETHVEAMLAGGS
ERGKCTLILTHGEFAFAMAGVSAWLDPDLYGVFPLSSKLLNVRDSRKLLKKKEIQILMTI
LGLVRNKKYSDAESLRYGRLMIMANQDEDGAYLKGLLINFIYSFWPSLLKVSKFMSVFTI
PIIKASNSKEGKELSFDSMQQYEDWEKDLGNTSTDDWEIEYCKGFTAAQEVKEYFQDLGE
RRAYFVWDDDDEQDGTSTSIELAFSKKAEEWKAWVCNSQMMQPGTCNYESKSIKYRDFVN
KELLFFSMKNLQRFIPSMVDGLTLGQRKTLFCSFKMKLTKPTEVFRLTTYVALHSFFHDD
EQSIASTIIGMAQDFVGSNNINLLIPYGQFGTRELGGKDHASFRKLCIKLNCVTRLLFPV
DDDKLLEYLNEDGKSVEPNCLSPHRYIPIIPLVLVNGCHAMGTCFSSDIPKYHPCEIIEN
VRRFLNKEVMVPMKPWYRGFRGTIKKSAKGYTVNGLVERINEQTVRIEELPIRMWTEDYK
KFLEKKTAQAHIESFRQIGVYEMVDFKVKMKPEKIATTEDEDKEELRRKFNLTCTISTSN
MYLFDAEGKIMKYNSPEQILEEFCRLRQEYYVKRKEYLVKNFKQLLRSLKMKQTFITNVV
YASCRIYRRAEFLTEILKKVKSSEPQVAGAIDYGSEEQKADEQETVATLGDYKYLSSLPL
ESFTRESLVKLEAELGEKKKELKTLKDTSPDSMWLNDLMLFEKEFDKLQKIQTEKDRNRS
SMLKKKNDFAIDAKKLSQPRNNQKEADDDIPSLACHFESSSGEKIRGTFFGDLVQEKATP
AKEGPTKAATTSKRKNVQPAESAGLSPNRKKVRMTRESPINKRSGSILDRAGNLDLSLNT
DLFDDSTNDSYMSDNSDDEQRWTRDISDSDSDGQ
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacggtgcgaacccgataccttcatcgattcaatcaaaagaaaaagaaaaata
cagaaacaatgggtttacgaagacggcaaaatagttcaccgcaaaatctcgtacgtccct
ggtctctacaacatcttcgacataatcctcgttcacgctgctgataaaaaacggcgagat
ccaagcatgaaccggttgagagtaaaaattgatactaagatgaatgagatttctgtttac
cacaacggtgctccattaataggcgatgaaacatttgatgatgtaataaacaattttgat
ctcacgaatagttactcgacttgtttttgggttgagcttgctgatgaatgtgggatttcg
agacaggagttcagtaataatatggatgttaagtttgagcgagtggtatgcaaagttgat
gactactcgaccatggtgacctttaagcctgacttaaccaagtttgaaatgacctgtctt
gaagaggacgttgtagctttgatgaaaaagcgtgtgctggacatggcagggtgccttggt
gatactgttacggttgaactaatcagcgaagtgattccattcaactctttcaaaggttat
gctgatttcttcttgaattgtgctcaggagtccacaccctttcccctgccaaggactcat
gccaaactaagtgatagcttggagatttgcctgagtctaagtgacgggaagtttcaacag
gtcagctttgttaactccattgctacaattaagggtgggactcatgttgattacatcacc
aagcaaattactacctatataaagaaggaagtattgaagatgaaggagcatgtcaatgtg
aatgctgacactgtgaagaatcgtttgtgggtttttgtcaatgctcggattgacaaccct
acctttcattctcaaaccaaagagatgttaaccactaaaccagctagattgggtttgaat
tcaaggctgactcatggtcaaaaatctgaaattgcgaaaaccctcctaccacggatacgg
atatgtttgaaacgaacacatgtggaaacgcatgtggaagccatgttggctggcggatcc
gagcgtggcaaatgtaccttgattttgacacatggagaatttgcctttgctatggccggg
gtctctgcttggttggatccagacctctatggtgtgtttccattgagcagcaaattgctc
aatgtgagggacagtagaaagctattaaaaaagaaagaaattcagattctgatgaccatt
cttggacttgtgcgaaacaagaaatacagtgatgcagaatctttgagatatggccggttg
atgattatggccaatcaggatgaagatggcgcttacttaaaaggactattgataaacttc
atttattcattctggccatcactacttaaagtttcaaaattcatgtctgtgtttaccatt
cctattataaaggcttctaattcaaaggaggggaaggagttatcatttgattctatgcag
caatatgaagactgggaaaaagatttgggtaacacctcaactgatgattgggagatagag
tactgtaagggctttactgctgcgcaggaagtgaaagagtactttcaagatcttggtgag
cgcagggcatattttgtttgggatgatgatgatgaacaagatggaacttcaacttcaatt
gagctggcattcagtaaaaaagctgaggaatggaaagcttgggtttgtaactctcagatg
atgcagcctggcacttgtaattatgaaagcaaaagtataaagtacagggattttgttaac
aaagaacttctgttcttctcaatgaaaaatctccaaaggttcattccgtctatggtagat
ggccttacacttggtcaaaggaagactcttttctgctcctttaagatgaaattgaccaaa
ccaacagaagttttccgattaactacttatgtggctctacattctttttttcacgatgat
gaacaaagtattgctagcacaattattggaatggcacaggattttgtgggcagcaacaac
atcaatcttctcataccttatggtcaatttggcactcgtgagctgggtggtaaagaccat
gcaagtttcagaaagttatgcattaagctaaattgcgttactcgtctcctcttccctgtg
gatgatgataagcttcttgaatacttgaatgaggatgggaagtccgttgaaccaaactgc
ttgtcaccacacaggtacataccaattattcctctcgtgcttgttaatggttgccatgcc
atggggacatgttttagttctgatattcccaaatatcatccatgtgaaattattgagaat
gtaagacgtttcttgaataaagaggtaatggtgccaatgaaaccatggtacagagggttc
agaggaaccattaagaaaagtgccaagggctatacagtcaatggtttagtggagagaata
aatgaacaaactgtcagaatcgaagagcttcctattcgaatgtggactgaagattataag
aagttccttgaaaaaaaaactgctcaggcgcacattgagagttttaggcaaataggggtt
tatgaaatggtagactttaaagtcaagatgaagccggaaaaaatagctacaacagaggac
gaagataaagaagagttacgcaggaagtttaacctgacgtgcactattagcacaagcaac
atgtatctttttgatgcagagggaaaaattatgaaatataactccccagaacaaattctt
gaagagttctgtagacttcggcaggagtattatgtgaagagaaaggaatatctagtgaag
aactttaaacaacttttgcggagtttaaaaatgaaacaaacttttataaccaatgttgtt
tatgcgtcatgccggatctaccgaagagctgaatttttgactgagattctgaagaaagtt
aaatcttcagaaccacaagttgcaggtgcaattgattacggttcagaagagcagaaagct
gatgagcaggaaactgtagcgacattgggtgactataagtatctttcatccttgcctctt
gaaagtttcacccgcgaaagccttgtgaagctggaagctgaacttggtgaaaagaaaaag
gagcttaagactttgaaggatacctcaccagattcaatgtggttaaacgatctcatgttg
tttgaaaaggaatttgataaactacagaaaattcagacagaaaaggatcgaaacagatca
agcatgttgaagaaaaagaatgattttgcaattgatgcaaaaaagctgtcacaaccacga
aataatcagaaggaagctgatgatgatattccatctcttgcatgtcactttgaatcatca
tctggtgaaaagatacgaggtactttttttggggacttagttcaagagaaggctacccca
gctaaggaggggcctacaaaggcagctaccacttccaaaagaaaaaatgttcagccagct
gaaagtgcaggtttatcacccaataggaagaaagtgagaatgacgagggagtcgccaatt
aacaagagaagtggttctatactggacagggctggtaacttggatttaagtttaaataca
gatttattcgatgactctactaatgattcttatatgagcgacaattctgatgatgagcaa
cggtggacgagggatattagcgacagtgattctgatggccaatga
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