Medicago truncatula (barrel medic): 25483447
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Entry
25483447 CDS
T01716
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
25483447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mtr03021
]
25483447
Transcription machinery [BR:
mtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
25483447
Prokaryotic type
Archaeal type
TFB
25483447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_8
Ribosomal_S27e
DUF7573
RB_B
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
25483447
NCBI-ProteinID:
XP_013467595
UniProt:
A0A072VII1
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All DBs
Position
1:complement(22432763..22437075)
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AA seq
312 aa
AA seq
DB search
MSEYFCSDCKRETEVVFNHSAGDTVCSECGLVLESHSIDETSEWRTFANESNDNDPNRVG
SASNPLLKDGGLSTYIAKPNGSSSEFLSPTLNRLQNRASNHDRTLLLAFKNITTMAERLD
LATFIKDRANEIYKRVEDQKSSRGRNQDALLAACIYIACRQEEKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLDNGQSMEMGTINAGDFMRRFCSTIDLNNQARKAAMEAVKKSEEF
DIRRSPITIAAAVIYIISQLSGDKKPLKTISIVTGVAEGTIKGSYKDLYPYITKIIPNWY
AKEEDLKSLSGP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtatttctgcagcgactgcaaacgcgaaacagaagtggtattcaaccactca
gcaggcgacacagtttgttccgaatgcggactcgttcttgaatcacattccattgatgaa
acctctgaatggcgcactttcgccaacgagtccaacgacaacgatcccaaccgtgtcggc
agtgcttctaaccctctcttaaaagacggtggtctctccacttacattgctaaacctaat
ggctcttccagcgagtttctttctccgactcttaatcgcttgcagaatcgtgcctctaac
catgatcgtacactccttcttgctttcaaaaatatcaccactatggccgaaaggttggac
cttgctactttcatcaaggatcgagcaaatgagatatataagagggttgaagaccaaaag
tctagtagaggaagaaatcaagatgctttgttggctgcttgtatctacatcgcttgccga
caagaagagaaaccaagaactgtaaaggaaatttgctctgttgccaatggtgccacaaag
aaggaaattggccgagcaaaagagtacatagtgaaacaacttggtttggataatggccag
tcgatggagatgggcacaataaatgctggagactttatgaggcgattctgctccactatt
gatttgaacaatcaagctaggaaagctgctatggaagcagtgaagaaatcagaagaattt
gatataaggaggagtcctataacaattgctgctgcagttatatacatcatatctcagctt
tctggtgataaaaaacctctaaaaactatatcaattgtcactggagttgcagaaggaact
attaaaggctcctacaaggatctttatccctatataacaaaaataataccaaattggtat
gcaaaagaggaggatttgaagagcctttctggcccttga
DBGET
integrated database retrieval system
