Medicago truncatula (barrel medic): 25483457
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Entry
25483457 CDS
T01716
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25483457
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
90S particles
Other 90S particles
25483457
Pre-60S particles
Other pre-60S particles
25483457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
HEAT_MROH2B_C
NopRA1
Motif
Other DBs
NCBI-GeneID:
25483457
NCBI-ProteinID:
XP_013467605
UniProt:
A0A072VIJ0
LinkDB
All DBs
Position
1:complement(22599836..22613366)
Genome browser
AA seq
1138 aa
AA seq
DB search
MEEEHADSFNDASDLCQQLMDRYAKSPAPHHRHLLAAAAALRSNLSSESLPLTPPAYFAA
AISTASSSESLDSVSLSSLASFMAIALPLVPTGAISTEKAREAAEIVGMLLVREEEGLVV
SSLRAAVKCVGVLLGFCDLEDWDSVKLGFQTLLKFSIDKRPKVRRCALESLEKFFRSLKS
STVIKEASKLVLSELKRCIDLTMKVTASRTVNECKDNGTSKPEHLEVLHVLNVVNLVAPN
LYPKVVPKVLSEVHKLFGSQVSALTRHVLKTIEAIFETSRIRSIVLEIENIVVSLASYVS
LGDKNPLDTVIVGATILRLAMDLLYIGQPSLWVKNLPLVCQPMMGLLTSEGNTASQASSI
LNDVLKHRIGSQSLLISTDQTVHDDSQLSLEGDAIKSTCAVFENTLSVTDGLPNEHLLSV
ISVLFHELGEFSSVSMRNIVLKLADLMIQTSDSKANNEHLQKCIGSAVFAMGPEKFLILV
PISLDEHSYTYSNIWLVPILKQYITGASLAFYMEHIVPLAKSFKKASRKVKKSKVSQDLL
VRAQELWGLLPSFCRHATDTYKSFARLSDVLTTFLKKNLSMHENVSTALQILVNENKAVL
NPKKEETECDAEQDSSLEFSMLPAYSKKAATRNMKALESYSSQLLHILSDLFISSPPQTR
ISLKGAISCLASITNSSVTKEVFVSLLKRFELVDCEGEGEGEVLTSNSSVLDIEPSDETG
CSQRCSILEISSCLVKGANDNLVEIIYNLTIHSFQATNESVHYEAYNTLSKILKEHPCYS
SKYMELIDLLLSIKPPTDVASLRNRFVCFHTLMIHIVKISFEEDVNSKAFLILNEIILTL
KDGKDEARKEACDLLLNISSSLRDLSCVGPTEPYHKLVSMIMGYLSGSSPHIKSGAVSAL
SVLVYKDANLCASIPDLVPSLLSLLHTKDTEIIKAVLGFFKVMVSCLEARELQNILSDVV
SEIIRWSSVSRHHFKTKVTVIFEILIRKCGSAAVRVVTPEKYMDFLKTVLENRHGKSNEA
AANDTENEVSAAKGLERRKPDILNTQEKDSFQQRKRKGKFERDMSSKTEPTKFRSNDEFR
SAKRSRHSNDTNSNLRSEGSMKGNKSQFKSFPHGDGKRRGKAPNVRIGASKSNKFKRK
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagcacgcagattccttcaacgacgcatccgacctctgccagcagctcatg
gaccgttacgccaaatcccccgctccgcaccatcgccacctcctcgccgctgcggccgct
ctccgctccaatctctcctccgaatccctccctctcacacctcccgcctatttcgctgcc
gcgatatccaccgcctcgtcgtcggagtctctagactccgtatcgctgtcctcgcttgct
tcctttatggcaatcgcgcttccgcttgtgccgactggggctatctctacggagaaggcg
agggaggcggcggagattgtggggatgttgctggtgagggaagaggagggtttggttgtt
tctagcttgagagctgcggtgaagtgtgttggggttttgctagggttttgtgatttggag
gattgggattctgttaaattagggtttcaaactttgcttaaattctccattgataaacgc
cctaaggttcgaagatgtgctctagagtctctcgagaagttttttaggtctcttaaatct
tccactgttatcaaggaagctagcaagttagttttgtctgagctaaagaggtgcattgat
ttgacaatgaaagtaactgcttcgaggactgttaatgaatgtaaagataacgggacttca
aaacccgagcacctggaagtcctacatgtactaaatgtagttaatctcgttgctcctaat
ctttatcctaaagttgttcctaaagttctttcagaagtgcataaattatttggttctcaa
gtctcggcacttacaaggcatgttcttaaaaccatagaagctatttttgaaacttcaaga
atccgaagtatagtcctggagatagagaacattgtagtttctcttgcttcttatgtatct
ttgggtgataagaacccactggatactgtgattgttggagcaaccatattaagacttgca
atggacttactttatattggacaaccaagcttgtgggtcaagaaccttcctctagtttgt
caacctatgatggggcttctaacttctgagggaaacactgcatcacaggcatcaagtatc
ttgaatgatgtgctcaagcatcgtattggttcccaaagcttattaattagtaccgatcaa
acagttcatgatgatagtcagctaagtttggaaggtgatgctataaaatcaacatgtgca
gtttttgagaacaccctctctgttactgatgggctcccaaatgagcatcttttgtcagtc
atatctgttttgtttcatgagcttggagaattctcatctgtatctatgaggaatattgtg
cttaaacttgctgacctgatgattcagacttccgatagcaaggctaataatgagcatctt
cagaaatgcatcgggtctgccgtttttgctatgggaccagagaaatttctcatacttgta
cctatctctcttgatgaacacagctatacttattcaaatatttggctagtaccgatcttg
aagcagtacattactggagcatcacttgctttctacatggagcatatcgtgcctcttgca
aagtcctttaagaaggctagtcgtaaagtcaaaaagtcaaaggtcagtcaagatctgctc
gttcgtgcccaagaattatggggattacttcccagcttttgtcgtcatgcaactgataca
tacaaaagttttgctcgtctaagtgatgtgctgactacttttcttaaaaagaacctctcc
atgcatgaaaatgtttccacggcactacagattcttgtgaacgagaataaagctgtactt
aaccctaaaaaggaggagacagaatgtgatgcagaacaggattcttcattagaattcagc
atgctacctgcttattcaaagaaagctgccaccagaaatatgaaggccttggaatcttat
tcgagtcaattgcttcatattttatcagatttatttataagttcacctcctcaaacacgc
atttcattaaagggtgcaatcagctgcctagcttcgataactaattcttctgtaaccaaa
gaagtttttgtgtctctgctcaagaggtttgagcttgtagattgtgaaggtgaaggtgaa
ggtgaagtattgactagtaacagcagtgtgttggacattgagccaagtgatgagacggga
tgttctcaaaggtgctcgatattggagatatcatcttgtcttgtcaaaggagccaatgat
aatcttgttgagataatttataatttaacaatacattcctttcaggcaactaatgaaagt
gttcattatgaagcatacaacactttgagcaaaattttgaaggagcacccttgctattct
tctaaatatatggagctaattgatttattacttagtataaaacctccaactgatgttgct
tctcttagaaaccggtttgtttgtttccacacgctgatgattcacattgtgaagattagt
ttcgaagaggatgtgaactcaaaggcttttcttattctgaatgaaatcattctcacatta
aaagatggaaaggatgaagctaggaaagaagcttgtgatttactcttaaatataagttct
agcttgagagatttatcctgtgttggtcctactgaaccgtatcacaaactagttagcatg
ataatgggatatctttctggttcatctccccatataaaaagtggagcagtgtctgcactg
tcagtattggtatataaggatgcaaacctttgtgcctccattcctgatctcgtcccttct
cttctatcgttgctgcacaccaaagatacagaaatcataaaagctgtcttgggctttttt
aaagtgatggtgtcttgcttagaagcaagagagttgcagaatattctctcagatgttgtc
tctgaaatcatccgttggtcgtctgtttcaagacatcattttaaaacgaaggtcacagtc
atatttgaaatattaattcggaagtgtggttctgctgctgtcagagtggttaccccagag
aagtacatggattttctcaagacagttttagagaatcgacatggaaaatcaaatgaagca
gctgctaatgatacagaaaatgaagtttcagctgccaaggggctggagcggaggaaacct
gatattttgaacacccaagagaaagactcgtttcaacaaagaaagagaaaggggaaattt
gagagagacatgtcaagcaaaactgaaccaactaagtttaggagcaatgatgaatttaga
tcagccaagagaagtaggcattctaatgatacaaattctaatttaaggtcagaaggaagt
atgaagggcaataaaagccaattcaaaagtttccctcacggtgatgggaagagaaggggc
aaagctcctaatgtacggataggagcttccaaatcaaacaagttcaaaagaaagtag
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