Medicago truncatula (barrel medic): 25483549
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Entry
25483549 CDS
T01716
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
25483549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25483549
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25483549
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
25483549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-Di19
zf-RING_UBOX
Rad50_zn_hook
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
25483549
NCBI-ProteinID:
XP_013467697
UniProt:
A0A072VI80
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All DBs
Position
1:27196380..27200668
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AA seq
309 aa
AA seq
DB search
MDLGGSSFKEVLEPHLIFSDFETAKSKSEANSNISFTKSRTCLDGKNGNHSKNGVYDLLE
CPVCKNLMYPPIHQCPNGHTLCSNCKITVHNRCPTCHRDLGNIRCLALEKVAESMELPCR
YQNLGCHDIFPYHSKLKHEQNCRFRPYSCPYAGSECSMMCDIQALMNHLKDDHKVDVHDG
FTFNHRYVKSNPHEVENATWMLTVFNCFGKHFCLHFEAFLLGTAPVYMAFLRFLGDEKEA
KKFRYSLEVGANSRKLIWQGIPRSIRESHRKVRDSQDGLIIQRNLALYFSGGDKQQLKLR
VTGRIWKEE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatctaggaggcagttccttcaaagaagttcttgaaccacacctgatattttcagat
tttgagacagctaagtctaaatctgaggctaattccaatatttcattcacaaaatcaagg
acttgtttggatggaaagaatggaaatcattcaaagaatggtgtgtatgacctacttgag
tgccctgtttgcaagaatttgatgtatcccccaattcatcagtgcccaaatggtcacaca
ttatgttcaaattgtaagattacggtgcataaccgttgcccaacatgtcaccgtgatctt
gggaatataaggtgtttggctttggagaaagtggcggaatcaatggagcttccttgcaga
tatcagaatctaggttgtcatgatatattcccataccactctaagctaaagcatgagcaa
aattgtcgatttcgtccatacagttgcccctatgctggatcagagtgctctatgatgtgt
gatattcaagctcttatgaaccatctcaaggatgatcacaaggtcgacgtacatgatgga
ttcacctttaaccatcgatatgtcaaatcaaatccacatgaagttgaaaatgccacatgg
atgctaaccgttttcaattgttttggaaagcatttttgcttgcactttgaggcgtttctg
cttggcaccgctccagtttacatggcatttttacgatttttaggtgacgaaaaagaagca
aagaagtttaggtatagcttagaggttggtgcaaatagccgcaaacttatatggcaagga
attccaaggagtattcgcgagagtcatagaaaagttcgtgacagccaagatggactcatc
attcagagaaacctagctctttatttttccggtggcgataaacaacaattaaagttgagg
gtcactggtcgtatatggaaagaagaatga
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