Medicago truncatula (barrel medic): 25483622
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Entry
25483622 CDS
T01716
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00906
Carotenoid biosynthesis
mtr01100
Metabolic pathways
mtr01110
Biosynthesis of secondary metabolites
Module
mtr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
25483622
Enzymes [BR:
mtr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
25483622
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
FAD_oxidored
GDI
HI0933_like
Thi4
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
25483622
NCBI-ProteinID:
XP_013467775
UniProt:
A0A072VJ38
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Position
1:complement(28016658..28022569)
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AA seq
596 aa
AA seq
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MLNSPILSLSNHTPIIYHHTPPTKFQSLPSCSYGRPEFSSGSCSNAFRRKGVVVKVKGMM
KLEEEVVESGKRGDFGEGFDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYVIPGGSSGFY
HREGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMQVIPDPTTVHFHLPNHLSVRVHR
EYDKFIEELTSYFPHEKDGILKFYGECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECL
TLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGIN
YPLGGVGGIAKSLAKGLVDQGSQILYKANVTSIITEQGKAVGVRLSDGREFFAKTIISNA
TRWDTFGKLVKGESLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLENNWT
SLEEPYGSIFLSIPTILDSSLAPEGRHILHIFTTSSMDDWQGLSRIDYEAKKQVVADEII
SRLEKKLFPGLRSSIDFIEVGTPKTHRRYLARDEGTYGPMPRSIPKGLLGMPFNTTSIDG
LYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDGMLLGLLGWLRTLA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattcccctatactctccctttctaaccacacccccatcatctaccatcacacc
ccacctacaaagtttcaatctttaccttcatgtagctatggaagacctgaattttcatct
gggtcatgctcaaatgcttttagaagaaaaggggtggtggtgaaagtgaaagggatgatg
aagttggaggaagaagtggtggaaagtgggaagagaggtgattttggtgaagggtttgat
gcaattgttattgggtctgggattggtgggttggttgctgggactcaattggctgtgaaa
ggtgcaaaagttttggttttggagaagtatgttatacctggtgggagttctgggttttat
catagggaggggtatacttttgatgttggttcttctgttatgtttggtttcagtgataag
ggtaatctcaacttgataacacaagcattggaagcagttggttgtcggatgcaggtaata
cctgatccgacaactgttcattttcatctaccaaaccacctctctgttcgagtgcacaga
gaatatgataagttcattgaagaactgacgagttactttccccacgaaaaggacggcatc
ttaaaattctatggtgaatgctggaagattttcaatgctctgaattcgttggagctgaaa
tcgcttgaggagccactctacctttttggacagttttttcagaagccacttgaatgcttg
acattagcctattatttgcctcaaaatgctggagccatagccaggaagtatattcaggat
ccacagttgttgtctttcatagatgctgagtgttttatagtgagcaccgtcaacgctttg
cagactccaatgattaatgctagcatggttctgtgtgacagacactttggtgggattaac
taccctctcgggggtgttggtggcattgcaaagtccttggcaaaaggtctagttgatcag
ggtagtcagatactttacaaggcaaatgtcacgagtattatcaccgagcagggcaaagcc
gtaggagtgaggctttcagacggcagagagttttttgccaaaaccataatatcaaatgct
accagatgggacacatttggaaagttagtaaaaggagaatcactaccaaaagaggaagag
aacttccaaaaagtttatgttaaagctccatcttttctttcaatacacatgggggttaaa
gcagaggttttaccaccagatacagattgtcaccattttgtgcttgagaacaattggacc
agtttggaggaaccatatggaagtatctttttgagtataccaaccatacttgattcatca
ttagctcctgaaggtcgtcatatccttcatatattcacaacttcttcaatggacgattgg
cagggtctctcaagaatcgattatgaggcaaagaagcaggtggtagcagatgaaatcata
agcagattagagaagaaattgtttccaggtcttagatcatccatcgattttatagaggta
gggacaccaaagacacatcgacgataccttgcccgtgacgagggtacttatggaccaatg
ccacgcagcattccaaaggggttgttaggaatgccgtttaatacaacaagcatagatggt
ctttactgtgttggagacagttgcttccctggacaaggtgttattgccgtagctttctca
ggagttatgtgtgcacatcgagtagctgcagatattgggttggagaaaaagtcacctgtt
ttggatggcatgctgcttgggttgcttggttggttaagaacactggcatga
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