Medicago truncatula (barrel medic): 25483869
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Entry
25483869 CDS
T01716
Name
(RefSeq) endoribonuclease Dicer homolog 2
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
25483869
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
25483869
microRNA pathway
RISC loading complex
25483869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
Dicer_dimer
PAZ
dsrm
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
25483869
NCBI-ProteinID:
XP_013468037
UniProt:
A0A072VJ60
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Position
1:30424865..30430542
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AA seq
999 aa
AA seq
DB search
MRCIVFVERVITAIVLEVLLNNLLPKYNSWTAKFIAGNSSKLQNQSRKNQNQIVEDFRMG
LVNVIVATSILEEGLDVQSCNLVIRFDPSPTVCSFVQSRGRARMQNSDYILMVKSGDSVT
RSRLEKYLDGVEMMRKESLHHSSLPCESLESDKFNEQTYRVASTGAVVNLSSSITLLYLY
CSRLPADGYFKPTPRWDKQTGTLYLPKSCPLQVQAVNVHGESKYLKNIACLEACKRLHMI
GALTDNLVPSIVVEKAEVEDFGNEPYDEDQPSYVPLELVNRMPNNSNTIYYCYLLELKQN
FSYDITVQDIFLATRVKLDLETECMQFNMGFDRGSLSVNLKYKGSINLSPDQVLLCKRFQ
VNVLGILMNHKTDMETVSDKFCLEDDLEFDYLLLPSIAIEETPSVDWITINSIHPSIVKC
LHHEANIWTEKGLVCPCILRNALICTPHNGRTYITTGIMELDGNSPLEVGDGEVITYKKY
FGQKHGIQLRFEHQRLLKARHVFPVKNYCHGYRQAKDRDVSKTFVELPPELCSIIMSPIS
VRTIYSFSFIPSIMHRLESLLVALNFKKMHLSLCPQNSIQTFKVLEAMTTKSCKENFHYE
SLETLGDSFLKYAVSQQLFNMYENHHEGLLSVKREKIICNAALCKLGCSSKLPGFIRNEP
FDPKTWIIPGVKSRCFKLEETVFKGTKIYTRGNRKLKRKIAADVVEALIGAFLSTGGEMA
ALLFLDWVGIKVNFNITPYERQFDACPDNLINVSFLESLLKHSFRDRSLLVEAMTHGSYM
LPDVPRCYQRLEYLGDAVLDYLITTHLYNEHPGMTPGQLTDMRSASVNNDCYAMSAIKVQ
LHKHVLHASQELHKHIAATLDKFDEQSSSQTFGWESEASFPKVLGDIIESLAGAIFVDSG
YNKEVVWQSIRPLLEPLVTPDTLTIHPIRELTELCQKMNYTMEKNLSRNDGVTSCRIEVI
ADGIIHQYEYKGSTDKKTATRLACKRVLNSLQLKETQDQ
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgagatgcatagtttttgtggaaagggttattacagctattgtccttgaggttcttttg
aacaatttgcttccgaaatacaatagctggacggctaaattcattgcaggaaacagtagt
aaattacaaaaccaatcaaggaaaaatcaaaatcaaattgttgaagatttccgtatggga
ttggtcaacgtcattgttgcgacatcaattcttgaggagggtttagatgttcaaagttgc
aatttggttattagatttgacccatctcccaccgtgtgcagttttgtacagtcccgtggc
cgtgccagaatgcaaaattcagattatatattgatggttaagagtggggattcagttaca
cgatctcgattagagaaataccttgatggtgtggaaatgatgaggaaggagtccttgcat
cattcttcccttccatgcgaaagtcttgaaagtgataaatttaatgagcaaacttaccgt
gttgcaagcactggagctgttgtcaatcttagttctagcattactttgttatacttgtac
tgctcacgacttccagcagatgggtactttaaaccgactccaaggtgggacaaacagact
ggaacgttgtatcttcctaagagttgtcctctacaagtacaagctgttaatgtacatggt
gaatcaaagtacttaaaaaatattgcatgtcttgaagcatgcaaacgacttcatatgatt
ggagctttgacagataatctcgttccttctatagtcgttgaaaaagcagaggtggaggac
tttgggaatgaaccatatgacgaggatcaaccaagttacgtaccgcttgaattggtgaat
cgtatgccaaacaatagtaacacaatatactattgttatttattagagctaaaacaaaat
tttagctacgatatcactgtgcaagacatttttcttgcaactagagtcaagcttgatcta
gaaactgaatgcatgcaatttaacatgggtttcgatagaggtagcttgtctgtaaatttg
aaatacaaaggatccattaatctctcgccggatcaggttcttttgtgtaaaagattccaa
gttaatgtccttggaattcttatgaaccataaaacagatatggaaactgtttccgacaag
ttctgtttggaagatgatcttgagtttgattatcttctgctgccatctattgctatagag
gaaacaccatctgttgattggataacaattaattccatacatccatctatagttaagtgt
ctgcatcatgaagcaaatatatggactgaaaagggtttagtttgcccttgcatattgcga
aatgctttgatttgtactcctcacaatggccgtacctacatcaccactggtataatggaa
ttggatggaaattcacctctggaagtaggggatggtgaagttatcacatacaagaagtac
tttggacaaaaacatggcattcaattgcgttttgagcatcaacgcctacttaaggcaaga
catgtttttccagtaaaaaattattgtcacggatataggcaagcgaaggacagagatgtg
agcaagacctttgttgagttacctcctgaactttgctctataatcatgtcaccaatatca
gtccgaactatttactcattttcctttattccatcgatcatgcatagacttgagtcattg
cttgtagctttgaactttaaaaagatgcatttgagtctttgcccgcagaacagtattcaa
acattcaaggtcttggaagcaatgaccacaaagtcatgcaaggagaactttcattacgag
tctctggagactctaggagattcttttttaaaatacgctgttagtcaacagctttttaat
atgtatgaaaatcatcacgagggtcttcttagtgtgaagagggagaagatcatttgtaac
gctgccctctgtaagttaggttgcagttctaaacttccgggcttcatacggaatgagcct
tttgatcctaagacctggatcattcctggagttaaatcaagatgttttaaattagaagag
acagttttcaaggggacaaaaatatatactcgcggaaatagaaaattgaaacggaaaatt
gccgctgatgttgttgaagcactaattggtgccttccttagcactggtggtgagatggct
gcattgctgtttttggattgggttggtatcaaagtgaatttcaatattacaccctatgag
aggcaattcgatgcttgtccagacaatctaatcaatgtcagctttctagaatccctcttg
aagcactcgtttagggaccgttcactgttagtagaagctatgacacacggttcttacatg
ctgcctgatgtgccaagatgctatcagcgacttgaatacttaggagacgcggtgttggat
tatctcattactacacatttgtataatgaacatcctggcatgacacctgggcagttaact
gatatgcggtcagcttctgtgaataacgactgttatgcaatgtctgccatcaaggttcaa
ctgcataaacatgtactccatgcctctcaggagttacataaacatattgcagctaccctt
gataaatttgacgaacagtcttcatcacaaacttttggatgggagtccgaggcttcattc
cccaaggtacttggagacatcatagagtctctagctggtgctatatttgttgattcagga
tacaacaaggaggttgtgtggcaaagcataagacctcttttggaaccccttgtgacacct
gatacattaacgatccatccgatcagagaactaactgaactgtgtcagaaaatgaattat
accatggagaagaacttgtccaggaacgacggagttactagctgtagaattgaggtaatt
gcagatggcataattcatcaatacgagtacaaaggttctactgacaagaaaacagctaca
agactagcctgcaagagagttttgaattccttgcagttgaaggaaacacaagaccagtga
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