Medicago truncatula (barrel medic): 25483983
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Entry
25483983 CDS
T01716
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
25483983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25483983
03009 Ribosome biogenesis [BR:
mtr03009
]
25483983
04131 Membrane trafficking [BR:
mtr04131
]
25483983
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
25483983
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
25483983
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
25483983
Membrane trafficking [BR:
mtr04131
]
SNARE
SNARE associated proteins
Others
25483983
Autophagy
Aggrephagy
Other aggrephagy associated proteins
25483983
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
25483983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_2
AAA_5
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
AAA_18
ATPase_2
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
NACHT
TsaE
Zeta_toxin
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
25483983
NCBI-ProteinID:
XP_013468169
UniProt:
A0A072VKP7
LinkDB
All DBs
Position
1:31896462..31900885
Genome browser
AA seq
810 aa
AA seq
DB search
MANQPESSDSKGTKRDFSTAILERKKSPNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDMFLVRGGMRSVEFKVIECDPAEYCV
VAPDTEIFCEGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEKIAKETHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFSTALGSSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKAALRKSPIAKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSDN
PEAMEEDNEDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFA
DTSAGGTTAAAADPFATASAGGADEDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaacctgaatcatccgattcgaaaggaaccaaaagagacttcagcaccgcg
attctggaacgcaaaaagtcaccgaaccgtcttgtcgttgatgaagctgtcaacgatgac
aactcagtggtcgcactccatcctgataccatggagaaacttcaactctttcgcggtgat
acaattctgatcaagggtaagaaaagaaaggatacgatttgtattgcacttgctgatgaa
acatgtgaagagccaaagataagaatgaataaggttgtgagaaacaatcttagggttagg
cttggtgatgttgtttctgttcatcaatgtcctgatgtcaaatatggaaagcgagttcat
attcttcctgttgatgatactattgaaggggttactgggaatctatttgatgcttactta
aagccttatttcctggaggcatatcgtccagttaggaagggagatatgttccttgtgaga
ggggggatgagaagtgtggaattcaaggttatcgagtgtgaccctgctgagtattgtgtt
gttgcacctgacactgagattttctgtgaaggagagcctgttaaaagggaagatgaggat
cgtttagatgaggttggttatgatgatgttggtggtgttagaaagcagatggctcagatt
cgggaactggtggaactgccattgaggcatccacaattattcaagtctattggtgtgaag
ccaccaaaagggattttgttgtatggaccccctggatctggtaagactttaattgcacga
gctgttgcaaatgaaactggtgctttctttttctgtatcaatggtcctgagatcatgtca
aagctggctggtgagagtgaaagtaatctgaggaaggcattcgaagaagctgagaagaat
gcaccctcaatcatcttcattgatgagatagactccattgctccaaagagggagaagact
aatggtgaagttgagcgaagaattgtttcccagctcttgaccctcatggatgggcttaaa
tcccgtgcacatgtaattgttatgggagcaacaaatcgtcccaatagcatcgaccctgct
cttcggaggtttggaaggtttgatcgggagattgatattggtgtaccagatgaagttgga
cgtcttgaggttctccgcatccatacaaaaaatatgaagcttgcagaagatgttgattta
gaaaagattgctaaggaaacccatggttatgttggtgctgatttagctgctttgtgtact
gaggctgcacttcagtgcatcagagagaaaatggatgtgattgacctagaagatgaaacc
attgatgctgagatacttaactcaatggcggtcacaaatgaacatttcagtaccgcactt
ggatcaagcaatccttctgctctccgtgaaacagttgttgaagtgcccaatgtcagctgg
gaagatattggtggtcttgaaaatgttaagcgagaactccaggagactgttcaatatcca
gtggaacaccctgagaaatttgagaagtttgggatgtcaccttcaaagggagttctgttc
tatggtcctcctggttgtggtaaaacccttttggccaaagctattgccaatgaatgtcaa
gcaaacttcattagtatcaaaggtcccgagctgctcacaatgtggtttggagaaagtgag
gctaatgtgagggaaatttttgacaaagctcgtggttctgctccatgtgtccttttcttt
gatgaacttgattctattgcaactcagagaggtagtagttcaggagatgctggtggtgct
gctgacagggttttgaatcaactgcttacagaaatggacggaatgtcggcaaagaaaact
gtgtttatcattggggccactaatcgtcctgacattatagaccctgctctactacgacct
ggacggctggatcagttgatttatatcccccttccagacgaggattcccgacatcagata
ttcaaagctgccttgagaaaatcccccattgcaaaggatgttgacattagagctcttgcc
aagtacactcaaggcttcagtggtgctgatattactgagatttgccagcgtgcttgcaag
tatgctataagagaaaacatcgagaaggacattgagagagaaaggaggagaagcgataat
cctgaagctatggaagaggataatgaagatgatgaggtagctgaaatcaaagcagcacat
tttgaagaatcgatgaagtatgcacgaagaagtgttagtgatgctgacattcgcaagtac
caagcctttgcccaaactttgcagcagtcaagagggtttggatctgaattcagatttgcc
gacaccagtgctggtggcactactgctgctgcagctgacccttttgcaactgcaagtgct
ggcggagctgatgaagatgacctctacagttag
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