Medicago truncatula (barrel medic): 25484083
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Entry
25484083 CDS
T01716
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
25484083
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
25484083
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
25484083
NCBI-ProteinID:
XP_013468292
UniProt:
A0A072VJW3
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Position
1:33023554..33026661
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AA seq
377 aa
AA seq
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MGNSHGHHRKHRFSVPNNTVPPPPYKYENSQHHYPPNQNQGTSNSNITMTTLPYANADIS
LRSLAAQAEGFGRCAIGGLHGSLYHVTSLLDDGPGSLRDACRKKEPLWIVFEVSGTIHLS
SYLSVSSYKTIDGRGQKIKLTGKGLRLKECEHVIICNLEIEGGRGPDVDAIQIKPNSKHI
WIDRCTLSDFEDGLIDITRGSTDITISRCHFHQHDKTILIGSDPKHVDDRCMKVTIHHCF
FDGTRQRHPRVRFAKVHLYNNYSRNWGIYAVCASVESQIFSQHNIYEAGQKKVAFKYLHE
KAADKDAEATGHIISEGDLFINGSQSGLMTENVGCNKFHPGEHYQTWTVEPPTDDLKQVL
HHCTGWQSVARPADQAV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggtaactcacacggacatcatcgcaaacaccgtttttctgtccctaacaacacggtt
cctccaccaccttataaatacgaaaactctcaacatcactatccaccaaaccaaaaccaa
ggtacttccaattccaacatcaccatgacaactttgccttacgctaacgccgacatctct
ctccgctccctcgctgctcaagctgaaggctttggccgctgcgctatcggtggacttcat
ggttctctttatcatgttacatcactcttagatgatggaccaggatcattgcgtgacgcg
tgtcgcaaaaaagaacctttgtggattgtttttgaggtttcgggtacaattcatctttcg
tcttacttgagtgtgtcgtcatacaagaccattgatggaaggggccaaaagattaagctg
actggaaaggggcttaggctgaaagaatgtgaacatgtaatcatttgtaatttagagata
gaaggcggcagaggacctgatgttgatgctattcagatcaaacctaactcaaaacatata
tggatagatcgttgcactttgagtgattttgaagatgggctcattgatatcactcgaggc
agcactgatattactatttcaaggtgtcattttcatcagcatgacaaaacaatactcatt
ggatcagatcccaaacatgttgatgatagatgcatgaaggttaccatacaccactgtttt
ttcgacggtactcgacagagacatcctcgtgttaggtttgcaaaagtacacctgtacaat
aattactccagaaattggggcatatatgctgtttgtgcaagtgtggaatcccagatattc
tcacaacataatatctatgaagcgggccagaagaaagttgcttttaagtatcttcatgag
aaggcagcagacaaagatgctgaagcaactggccacataatttctgaaggagacttattc
ataaatggttctcaatcagggttgatgacagagaatgttggttgtaacaagtttcatcct
ggtgaacactatcagacatggacagtggaacctcctacagatgatctaaagcaagttctt
catcactgtactggatggcaatctgttgcgaggccagcggatcaagccgtttga
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