Medicago truncatula (barrel medic): 25484152
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Entry
25484152 CDS
T01716
Name
(RefSeq) polyadenylate-binding protein 2
KO
K14396
polyadenylate-binding protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
25484152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25484152
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
25484152
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SLU7_N
RRM_5
RRM_occluded
Slu7
RRM_11
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
25484152
NCBI-ProteinID:
XP_013468372
UniProt:
A0A072VK90
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All DBs
Position
1:33632109..33635893
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AA seq
283 aa
AA seq
DB search
MNHEQQLMTGSCTNCGLPNHSEKSCFERPQRVPARFRQNLVPEPIARELVPASDGWDRYL
LKKKEDKDSTGGFRSLRLRGDIPEYLLKKVSKDSDDTTDLTTHFDPRTRFNYREKMSSAD
KYFNAGSQLQMSSWVDREDIVRGPAGSSVPHVANEDTYARSIHVGNVHYACTPKEVQQHF
QSCGTVNRVKILTDKFGRPEGFACVEFVEADAVQNALGLNGSELHGRLLNVSSKCTHVPE
LKQYRRRHAGFRGRRPVRSSPYFPPNAYRRVPRYRRPTRYQPY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgaacaacaattgatgacaggatcttgcaccaactgtgggcttccaaaccat
tctgaaaaatcttgttttgaaagaccccagagagtccctgcaaggtttcgccagaacctt
gttccagaaccgattgcaagagaacttgttcctgcatctgatggatgggacagatatttg
ttgaagaaaaaggaagacaaagatagcacaggaggattcagaagcttacgccttcgagga
gatatccccgaatatcttctaaaaaaagtctcaaaagactccgacgatacgactgatctg
acaacacattttgatcctcgcacccggtttaattatagggaaaaaatgtcatcggcagac
aaatattttaatgctggaagtcaactccaaatgagttcttgggtggatagagaggacatt
gttcgaggtcctgctgggtcatctgtacctcatgtagcaaatgaggatacatatgctaga
tcgattcatgtcggtaatgttcactatgcatgcacacctaaggaagttcaacagcatttt
cagtcctgtggtactgtcaacagagtcaaaatattgacagacaaatttggtcgaccggaa
ggatttgcttgtgtagaatttgttgaagctgatgctgttcagaatgctctcggtttaaat
ggatctgaattacatggccgactgctgaatgtgtcttcaaaatgcactcatgttcctgaa
ttgaagcagtacagaagaaggcatgctggtttccgtggcaggaggcctgtccggtcttca
ccatactttccgccaaatgcttacagaagggttccgagatatagaagacccactcgatac
cagccatactag
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