Medicago truncatula (barrel medic): 25484247
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Entry
25484247 CDS
T01716
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00510
N-Glycan biosynthesis
mtr00513
Various types of N-glycan biosynthesis
mtr01100
Metabolic pathways
mtr04141
Protein processing in endoplasmic reticulum
Module
mtr_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
25484247
00513 Various types of N-glycan biosynthesis
25484247
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
25484247
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Gene cluster
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
25484247
NCBI-ProteinID:
XP_013468471
UniProt:
A0A072VM58
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All DBs
Position
1:34366792..34375338
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AA seq
689 aa
AA seq
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MATTAVGAAAFLLLLLLPFSFSISPPISDSHRSAASNLFTQVSPSLEDSYEALRVFEILS
IQKKPIVTKDTCQKVLENLGSSSSPLKDAFYALKVNGILKCKVDAAIFKDIASRLKATVN
DASNLLDIYYSVGILVLIKDQASNVDVLLTDANGVFHSIKALSQSDGKWRYSSNNPESSI
HAAGLALEALAGVVSLASSEIDQSKVSIVNNGIVKLFDSIEKYDDGAFYFDEKTVRGSEH
QGSLSATSSVVRGVTAFAAVTSGKINVPRDTILGLAKFFLGIGIPGDAKDFFHQVESLSF
LESNRISIPLILSLPETVYSLTKKGQLKVKVNTVLGSAAPPLTVKLVRASSTGAKDSAII
ESKELQYDQKSGFHFLDSFPNNVDVGTYVFVFEIVLQDSESDKVYATGGQIHVPIYITGI
IKVGSAEIAVLDSDLGNVETHKTLDLAGNDVVSLSATHLQKLRLSFQLETPHGRVFKPHQ
AFLTLRHETKIEHVFLVGNTGKKFEIKFDFLGLVEKLFYLSGKYDIELTVGDAVMENSFS
RLLGHVELDLPEAPEKAARPPAPPVDPYSRYGPKAEINHIFRAPEKRPPQKLSLVFLGLI
LLPFIGFLVGLLRLGVNLKNFPGSTVPATFATLFHLGLAAILLLYVLFWLKLDLFTTLKT
LGLLGAFTMIVGHRILSHLASTSAKLKSA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaccgccgtaggagcagcagcgtttctcctgctgctacttctccctttctcc
ttctccatctctccaccgatctccgattctcaccgatccgctgcttccaatctcttcacc
caagtctctcccagtttggaagattcgtatgaggctttgagagtttttgagattctatca
attcagaagaagccaattgttaccaaagacacttgtcagaaagtgttggaaaatctaggc
tcatcttcttcgcctcttaaggatgcgttctatgcgttgaaagttaatggcatattgaaa
tgcaaggttgatgctgcgattttcaaggatattgcctcaagacttaaagccaccgtcaat
gatgcaagtaatttgcttgacatatactactcagttggaattttggttcttatcaaggat
caggcttctaatgttgatgttcttcttactgatgctaatggcgtttttcattcaatcaag
gctctaagccaaagtgatggaaaatggcgctacagctccaataatccagagtctagtatc
catgctgctggattagcacttgaagcgcttgctggagtggtttcacttgcctcttctgaa
attgatcagagtaaggtcagtatagtaaacaatggtatagtgaagcttttcgacagcatt
gagaaatatgatgatggagcattttattttgatgagaaaactgttaggggatctgagcat
caaggttctctttccgcgacttcttcagttgttcgaggggttactgcatttgctgcagta
acgtctgggaaaataaatgttccaagggatacaatattgggcttagcaaagttcttcctc
ggcattggaatcccaggagatgccaaagacttcttccatcaagttgaatcgttatctttt
ttagagagcaacaggatctccattccattgatattgtcacttcctgaaacagtttattca
ttgaccaaaaaagggcagcttaaggtcaaggtcaatacagtgcttggttcagctgcacca
cctctgacagttaagcttgtccgagcttctagcactggtgcaaaagactcagctattatt
gaaagcaaggagcttcagtatgaccaaaaaagtggatttcatttcttggattccttccca
aacaatgttgatgtgggaacatatgtttttgttttcgagattgtgctacaagattctgaa
agtgacaaagtttatgctactgggggccaaattcatgtgccaatttacatcactggaatt
attaaagttggcagtgcagaaatagcagttctggacagcgatcttggaaatgttgaaacc
cataagacgttggatttggctggaaatgatgttgtttcactctccgccacccaccttcag
aagttgaggctttctttccaattggaaactcctcatggtcgtgttttcaagcctcatcag
gcatttttaacattaagacatgaaacaaagattgaacacgtgtttttggttggaaatact
ggcaagaaatttgagattaaatttgattttcttggcttggtggaaaaacttttttatctc
tctggcaaatatgatattgagctgactgttggtgatgctgtcatggagaactctttctca
cgactactaggccatgtcgaattagatcttccagaagctcctgaaaaagcagcacgtcct
cctgcaccacctgttgatccttactcaagatatggccccaaagcggagattaatcacata
ttcagggctcctgaaaagcggccaccacagaaactttctcttgtgtttttgggtctgatc
cttttgccattcattggctttttggtcgggttgttacgattgggggtgaacctgaagaat
ttccctggttcaacagtacctgctacatttgccacccttttccatcttggtcttgctgca
attctgttgctttatgtacttttctggttaaagctggacctatttaccacactcaaaaca
cttggtcttttgggagcttttacgatgattgttggacacaggattctttcccatcttgct
tcaacatcagccaagttgaaatcggcatga
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