KEGG   Medicago truncatula (barrel medic): 25484620
Entry
25484620          CDS       T01716                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    25484620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    25484620
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     25484620
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     25484620
SSDB
Motif
Pfam: EXOSC1 ECR1_N ECR1_N_2 RRP4_S1 CHASE5
Other DBs
NCBI-GeneID: 25484620
NCBI-ProteinID: XP_024637539
LinkDB
Position
1:complement(39312282..39315534)
AA seq 195 aa
MEAERDMVTPGEVIGKTHDVKAGRGTYTSTHNNTVYASLTGFRHTIPPASDSPDQRPIVE
VTGHKAHGPVPEPGSVVIVRVTKVMTKIAEADIMCVGQKSVREKFTGVIRQQDVRATEID
KVDMHLSFRPGDIVKALVLSLGNARAYFLTTAKNELGVVSAESTAGATLVPISWTEMQCP
LSGQIEQRKVAKVAS
NT seq 588 nt   +upstreamnt  +downstreamnt
atggaagcagagcgagacatggtgacaccaggagaagtaataggtaaaacccacgacgtc
aaagccggaagaggaacctacacatcaactcacaataacacagtctacgcttctttaact
ggtttccgtcacaccatacctcctgcttcggactctcctgaccagagacccattgttgaa
gtcactggtcataaagctcatggacctgttcctgaacctggatctgtcgttattgttagg
gttactaaagtgatgactaaaattgctgaagctgatattatgtgtgttggtcagaagtct
gttcgtgaaaaatttactggcgtaattaggcaacaagatgttagggcaactgagattgat
aaagtagacatgcacttgtcttttcgtcctggtgacattgttaaagctcttgtgctttcc
cttggaaatgcacgggcttactttctgacaactgcaaagaatgagcttggcgttgtttcg
gcagaaagcactgctggtgcaactttggttccaataagttggactgagatgcagtgtcca
ctatctggtcaaattgaacaaagaaaggttgcaaaggttgcaagctga

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