KEGG   Medicago truncatula (barrel medic): 25484665
Entry
25484665          CDS       T01716                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    25484665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25484665
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     25484665
SSDB
Motif
Pfam: WD40_Prp19 WD40 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_DCAF4 RAWUL WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 25484665
NCBI-ProteinID: XP_013469015
UniProt: A0A072VMJ6
LinkDB
Position
1:40285306..40302636
AA seq 763 aa
MHKVGSVGNLNNSTRPRKEKRLTYVLNDADDTKHCASINCLAVLKSAASDGSDYLFTGSR
DGKLKRWALAVDAATCSATFESHSDWVNDAVLVGDSTLVSCSSDTTLKTWNALSTGTCTR
TLCQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDIEAALASATKCNEAMDDDTSNFVNS
SGNSLPMTSLRTIGSSNSISMQAQTEVYIPVTAKGHKESVYALAMNEGGTLLVSGGTEKV
VRVWDPRSGSKTMKLKGHTDNIRALLLDSTGRFCLSGSSDSMLRLWDLGQQRCVHSYAVH
TDSVWALASNSTFSHVYSGGRDSSLYLTDLHTRESVLLSTGEQPILQLALHDDSIWVAST
DSSVHRWPAEACNPQKIFERGNSFIAGNLSYSRARVSLEGSTPVPEYKQPILTIPGIPAI
VQHEVLNNKRHVLTKDTSGSVKLWEITKGIAIEDYGKVPFDKKKEELFEMVSIPAWFTVD
TRLGSLSVHLDTPQCFAAEMYSQELNIVDKPEDDKINLARETLKGLLAHWLRKQKQRMGT
PASANGELLSENDIGTRSLSHSRIEVDGSSENDTMVYPPFEFSIVSPPSIITEGTHGGLW
RKKITDLDGTEDGKDIPWWCVDCVSSNRLPPRENSKCSFYLYPCEGSNVQIHTQGKLSAP
RILKIQKVINYVIEKLVLDKPLDSVNADGSFPPGIAGSQLQHQTVGDGSFRSGVRPWQKV
RPSIEILCNNQILSPEMSLATVRAYIWKRTDDLALHYRVIHGR
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcacaaggtgggtagtgtagggaacctaaataattcaactcgcccgcgtaaggagaag
aggttgacatatgtgttgaatgatgctgatgacacaaagcattgtgcaagcataaattgc
ttggctgtacttaagtccgcagcatctgatgggtctgattatcttttcactggaagccgt
gatggcaagctaaaaaggtgggcactggctgtggatgcagcgacatgctctgcgaccttt
gaatctcactcagattgggtaaatgatgcggttcttgtgggtgatagtacacttgtttct
tgttcttcagatacaacccttaagacatggaatgctttgtccacaggaacatgtactagg
acgctctgccaacactcagattatgttacttgccttgcagcagctgaaaagaatagcaat
attgttgcctcgggtggccttggcggggaggtttttatatgggatattgaagctgcactt
gcttcagctacaaagtgcaatgaggctatggatgatgatacttcaaattttgtcaatagt
tctggcaactcattgccaatgactagcttgcgtaccattggctctagcaacagtatatcg
atgcaagctcaaactgaagtatacattccggttactgccaaaggccataaggaatctgtt
tatgcattggcaatgaatgaaggtggaacacttcttgtttctggtggtacagaaaaggtt
gtacgtgtttgggatccaagatctggatcaaagactatgaagctaaaagggcatacagat
aacattagggctttgcttctggattctactggcaggttttgtttatcaggatcttcagac
tctatgttaaggctttgggatctcggtcagcaacgttgtgtgcattcatatgcggttcat
acagattctgtttgggctcttgctagcaactcaacgtttagtcatgtttatagtggtggt
agagactcttctttatacttgacagatttgcatactagagagagtgttttgcttagcact
ggggaacaaccaattcttcaattggctttgcatgatgatagcatatgggttgcatcaacg
gactcgtcggttcacagatggcctgctgaagcatgcaaccctcaaaagattttcgaaaga
ggcaattcttttatagctggaaatttgtcatattcaagagcgagggtgtctctagaagga
tctacccctgttcctgaatataaacagcctatcttgactattcccggcatccctgcaata
gtacagcatgaagttttaaataataagaggcatgtgctgactaaggatacttctggttca
gtgaagttgtgggaaatcacgaaaggtattgcaattgaagattatggaaaggtaccattt
gacaagaaaaaggaagagctatttgagatggttagcattcctgcatggttcacagtggat
actagacttggaagtttgtctgtgcatttggacactccccagtgctttgctgcagagatg
tattcacaagagcttaacattgtagacaagcctgaagatgataagattaacttggctcga
gaaacacttaaaggactcctggctcattggttgagaaagcaaaagcaaaggatgggaact
cctgcttctgctaatggggaattattatctgaaaatgatattggtactagaagtctttca
cattcaagaattgaggttgatggaagttctgagaatgatactatggtttatcctcctttt
gaattctcaattgtttcccctccttccattattaccgagggaactcatggaggtctgtgg
aggaaaaagattacagatttagatggaactgaggatggtaaagacatcccctggtggtgt
gtggactgtgtatcgagtaatcggttacctcctagagaaaattccaaatgcagtttctat
ttatatccttgtgaaggctctaatgttcagatccatactcaagggaagctaagtgctcca
cgtatattaaaaattcagaaggttattaattatgttatagaaaagttggtgcttgacaaa
cctttggatagtgtcaatgccgatggtagttttccccctggtattgctggatcacagcta
cagcaccaaacagttggggatggatctttccgatctggcgttaggccttggcaaaaagtt
agaccttctattgaaatattgtgcaacaatcagatattgtctccagaaatgagtttagcc
acagtgcgggcttatatatggaagagaacagatgacctagccctacattacagagtaatt
catgggaggtga

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