KEGG   Medicago truncatula (barrel medic): 25484933
Entry
25484933          CDS       T01716                                 
Name
(RefSeq) ras-related protein RABF1 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr04144  Endocytosis
mtr04145  Phagosome
mtr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    25484933
   04145 Phagosome
    25484933
   04148 Efferocytosis
    25484933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25484933
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mtr04147]
    25484933
   04031 GTP-binding proteins [BR:mtr04031]
    25484933
Membrane trafficking [BR:mtr04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    25484933
 Endosome - Lysosome transport
    25484933
Exosome [BR:mtr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   25484933
  Exosomal proteins of other body fluids (saliva and urine)
   25484933
  Exosomal proteins of colorectal cancer cells
   25484933
  Exosomal proteins of bladder cancer cells
   25484933
GTP-binding proteins [BR:mtr04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    25484933
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 25484933
NCBI-ProteinID: XP_013469456
UniProt: A0A072VNB2
LinkDB
Position
1:complement(46073078..46079275)
AA seq 204 aa
MGCGSSFPDRDSRQLGRPSPENGGGDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIAYDITSPESF
SKAQYWVKELQKHGSPDIVMALVGNKADLQEKREVAVEDGMDYAEKNGMFFIETSAKTAD
NINELFEDIVDYATSKLPYDVLAA
NT seq 615 nt   +upstreamnt  +downstreamnt
atgggttgcggctcctcctttccagatagggattcaaggcagctaggtagacccagtccc
gagaatggtggaggagacgctaaaaatcttcgtgttaagcttgtcctcttaggtgattct
ggtgttggtaagagttgcattgttctgcgatttgttcgtggtcagtttgatccaacatcc
aaggtaactgttggagcttctttcttgtcacaaacaatcgctctgcaagactctacaaca
gtcaagtttgaaatatgggataccgctggtcaagagaggtatgctgccttggcaccactg
tattatcgtggtgcagcggttgcagttattgcctatgatataacaagcccagaatctttc
agcaaagcacagtactgggttaaggagctacaaaaacatggaagccctgatatagtgatg
gcattggttggtaacaaagccgatcttcaagagaagcgggaggttgctgttgaggatggc
atggactatgcagagaagaacggaatgttttttatagagacatccgcaaagacagcggat
aatataaacgaactgtttgaggacattgttgactatgctactagcaagcttccctatgat
gttcttgctgcctga

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