Medicago truncatula (barrel medic): 25484985
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Entry
25484985 CDS
T01716
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25484985
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25484985
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
25484985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
25484985
NCBI-ProteinID:
XP_013469537
UniProt:
A0A072VZT8
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All DBs
Position
1:complement(47250660..47255641)
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AA seq
441 aa
AA seq
DB search
MGSSNLCFFFFSLVSLFAMAAAKVVLIGNNITLSFDDIEANFAPSVKGSGEYGALFLAEP
LDACTELTNKARTLSNASSPFVLMVRGGCSFEDKVRIAQSAGYKAAIVYDSEDGGILVAM
AGNSAGVSIHAVFVSKASGEILKKYTGLINVETWLIPTFENSAWSIMAISFISLLAMSAV
LATCFFVRRHRIRRERPRTSSHVREFHGMSSRLVKAMPSLIFTSALEDNCTSRTCAICLE
DYCAGEKLRILPCCHKFHAACVDSWLTSWRTFCPVCKRDARTGLADPPPSESTPLLSSTP
SSAASSFVSSMRSSFASSSAIQIGSPSQSVSRNHSLVSTPYNQPSLRSYRQSPSLSFSRS
SVDLRNASQRSLASHMNSPRSIGYPSLSSLNSRYLPSHIPSPSNASVSFLGSSSHQQHPL
RYSESASSFSPFASANSLPEC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggttcctcgaatctttgcttctttttcttctctttggtgagtttgtttgctatggcg
gctgctaaggttgtgttgattgggaacaacatcactctctcgtttgatgatattgaagct
aatttcgctccatcggtcaaaggttctggagaatatggagccttattcttggcagagccg
cttgatgcatgtacagaacttacgaataaagctagaactctttcaaatgctagttcacct
tttgttttgatggttagaggggggtgtagctttgaggacaaggttaggattgcacaaagt
gctggctacaaagctgcaattgtctacgacagtgaagatggtggcatcctggttgcaatg
gcaggaaattctgctggtgtaagtatacatgcggtatttgtttcaaaagcttcgggtgaa
atactaaagaaatacactggtttaattaatgtggaaacatggctcattccaacttttgaa
aactcagcatggtctatcatggcaatttcgttcatttccctgctagctatgtctgcagtg
ctggccacttgtttcttcgtccgcaggcatcgtatacgaagagaaaggcctcgaacttct
tctcatgttcgtgaatttcatggcatgagtagtcgcttagtgaaagcaatgccaagtttg
atttttacttctgctttggaagataactgtacatcaagaacatgtgccatctgccttgaa
gattattgcgctggagagaaactcaggattctgccctgctgtcacaagtttcatgctgcc
tgtgtggattcttggcttacttcgtggagaaccttttgcccagtttgcaagcgtgatgca
agaacgggtctggctgatccaccaccttcagaatcgacacctctgctgtcatcaaccccg
tcatctgcagcatcctctttcgtgtcttctatgaggtcatcatttgcttcatcttcagca
atacaaattggttcaccgtcgcaatctgtttctcgtaaccactctttagtaagtacccct
tacaatcagccatctctaaggtcctaccgtcaatccccctccctaagcttcagccgtagc
tccgtggatcttagaaacgcatctcaaagatctctagcttcacacatgaattcaccgcgt
tccatcggttatccatctttatcatctcttaactcaaggtacttgccttcacacattcca
agtccaagcaatgcttcagtaagtttcctcggttcatccagtcatcagcagcatccactt
cgatatagtgagtcagcctcaagcttctcaccatttgcgtctgccaactcccttccggaa
tgttga
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