Medicago truncatula (barrel medic): 25485320
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Entry
25485320 CDS
T01716
Name
(RefSeq) ribosomal RNA small subunit methyltransferase E isoform X1
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25485320
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
25485320
Ribosome biogenesis [BR:
mtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
25485320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
SH3_13
Methyltrn_RNA_2
Motif
Other DBs
NCBI-GeneID:
25485320
NCBI-ProteinID:
XP_013469968
UniProt:
A0A072VQR6
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All DBs
Position
1:51687122..51691561
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AA seq
286 aa
AA seq
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MLQTLVVPARFRFANRISLRRSLSRIRSFNSDYGDQSRGGLPRFYSEILPPSKGNVIRVK
GDEFWHMTKVLRLSTNARVQLFNGKGGLVEGCIQNIDRTGLDFIALTDLKLVPPQNFQLH
VFSGFGTLKGGRADWLVEKCTELGASSVTPLLTERSPSISENRVDRLERVILAASKQCQR
LHEMILKPPVEIGDILHLIAQSKLSLVATAEATPVLNALTSPEKETSGLIVVGPEGDFTE
KEVNMMMEAGAKAVSLGPHRLRVETATIALLTTVMLWSDSKQISVS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaaccctagtagttcccgcaaggtttcgcttcgcaaatcgaatatctctccgt
cgaagcttgagcagaattcgttcattcaattccgattatggagatcagtctcgtggtggg
ctccctcgattctactctgaaattcttcctccttcaaagggtaatgttattcgtgttaaa
ggcgatgaattctggcacatgactaaagtattgaggctctccaccaatgctagggtacaa
ctcttcaatggaaaaggaggtttggtagaaggatgcatacagaacattgaccgcactgga
cttgattttattgcattgactgatctgaagttagtgcctccacaaaattttcaattgcat
gtattttctggttttggtactctgaagggtgggcgcgctgactggcttgtagagaagtgt
acagaacttggagccagtagtgttactccgctattgactgaacgttctccgtcaatctca
gaaaatcgggtggacagactggaacgtgtcattttagcggcatctaaacaatgtcaaaga
ctgcatgaaatgatcctgaaacctcctgtagagattggtgatattttgcatcttattgcg
caatcaaagctatctcttgttgcaacagcagaagcaactcctgttcttaatgcattgacg
tcaccagaaaaggaaactagtggcttaatcgtagtcgggccagagggcgatttcactgag
aaagaagtgaatatgatgatggaagcaggtgctaaagctgttagtcttggacctcatcgt
cttcgggttgaaactgccacgatagcacttctgactactgttatgttatggtccgactct
aagcaaatttctgtctcttga
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