Medicago truncatula (barrel medic): 25485435
Help
Entry
25485435 CDS
T01716
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mtr04990
]
25485435
Domain-containing proteins not elsewhere classified [BR:
mtr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
25485435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_EIPR1
eIF2A
Beta-prop_ELP1_1st
KNTC1_N
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
25485435
NCBI-ProteinID:
XP_013470092
UniProt:
A0A072W1G5
LinkDB
All DBs
Position
1:52570959..52575694
Genome browser
AA seq
609 aa
AA seq
DB search
MATLSETYACAPSTERGRGILISGDPKTNNILYCTARSVIIRNLDNPLQVSVYGEHSYPV
TVARYSPNGEWIASADVSGTIRIWGTHNDYVLKNEFRVLSGRIDDLQWSADCQRIVACGD
GKGKSFVRAFMWDSGSTVGDFDGHSRRVLSCAFKPTRPFRIVSCGEDFLANFYEGPPFKF
NMSIRDHTNFVNCVRYSPDGSKFVTVSSDRKGIIYDGKTGSKLGEFSEEDGHKGSIYAVS
WSRDSKQVLTVSADKSAKVWDIDENGSGTVHKTLAHPESGGVEDMLVGCLWQNDHLLTVS
LGGTISLYSAKDLDQSPKSLSGHMKNITVLNLLNKSEKMLLSSSYDGVIIRWIPGIGYSG
KFDSKQFGLIKLLAAAEEEVVTSGFDNKVYRVPLQGDNFGPAEHVDVGSQPKDLGLALNS
PKLALIGIESGVVLLNGSNIVTTVNLGFVVTASTISPDGSEAIVGGQDGKLHIYSISGDT
LTEQIVLEKHRGAISVIKYSPDVSMFASADLNREAVVWDCASREVVLNNMLFHTARVNCL
AWSPNSKLVATGSLDTCVIVYEIGKPASSRRTIKGAHLGGVYGLTFIEPERVVSSGEDSC
VRVWDLISE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctctctgaaacctacgcttgcgcaccttccaccgaacgcggccgcggcatt
ctcatctccggcgatcccaaaaccaacaacattctctattgcactgcacgatccgtcatc
attcgcaatcttgataatcccttacaggtctctgtttacggcgaacattcttatcctgtc
accgtcgcacgttactcccccaacggcgaatggatcgcgtccgctgatgtttccggtacc
attcgcatttggggaactcataatgattatgttctcaagaacgaatttcgtgttctatct
ggtcggatcgatgatcttcagtggtctgcagattgccagaggattgttgcttgtggagat
ggaaagggaaaatcgtttgtccgcgcttttatgtgggattcaggttccactgttggtgat
tttgatggccattcacggcgggttctaagttgtgcattcaaaccaacaaggccattccgc
attgtctcgtgtggagaagattttttagcaaacttttatgaaggtccgccgttcaagttc
aatatgtccatcagggaccatacgaattttgtcaactgtgttagatattctccagatggg
agcaaattcgttacagttagctcagataggaagggtattatatatgatggaaagactggg
agtaaacttggagagttttctgaagaggacggtcacaagggcagcatatatgcagttagt
tggagtcgtgacagtaaacaggttcttactgtctctgctgacaagtctgcaaaagtgtgg
gatattgatgagaatggtagtggaacagtacataagacattggcacatcctgaatctggt
ggggtggaggacatgctcgttggttgtctttggcagaatgatcatctgcttactgtctcc
cttggtggcacgattagtttatactctgctaaggatctagatcaaagcccaaagtcctta
tctggtcacatgaagaatatcactgttttgaatctgctcaacaaaagtgaaaagatgctt
ttgtctagcagctatgatggagtgatcattagatggattccaggcattggctatagtggt
aagtttgacagtaaacaatttggattaatcaaattgttagcagctgctgaagaagaagtt
gttacttctggatttgacaacaaggtatacagagttcccctgcaaggggataattttggt
cctgctgagcatgttgatgttggaagccagccaaaggatttgggccttgcacttaattcc
cccaagcttgctcttattggaattgaatccggggttgtcttacttaacggttcaaatatt
gtcaccactgtaaaccttggctttgttgtgacagcgtctactatttcacctgatggcagt
gaagcaattgtaggtgggcaagatggtaagctgcatatttattctatctcaggagataca
cttacagaacaaattgttcttgagaagcaccgaggagcaatcagtgtaatcaaatattct
ccagatgtttccatgtttgcatcagctgatctaaatcgtgaagctgttgtgtgggactgt
gcttccagagaggtggtgcttaataacatgttgtttcacactgcacgtgtaaactgtctt
gcttggtcacctaatagcaaactggtagctactggttcacttgatacatgtgttattgta
tacgaaattggaaagccagcatcaagccgcagaaccataaaaggggctcatttaggtgga
gtgtatggcttgacttttattgagccagaaagagtggtcagttcgggagaagatagttgc
gttcgtgtttgggatttaatttcagaataa
DBGET
integrated database retrieval system