KEGG   Medicago truncatula (barrel medic): 25485470
Entry
25485470          CDS       T01716                                 
Name
(RefSeq) elongator complex protein 2
  KO
K11374  elongator complex protein 2
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mtr03016]
    25485470
Transfer RNA biogenesis [BR:mtr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    25485470
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_ELP1_2nd Beta-prop_WDR11_1st GH97_C
Other DBs
NCBI-GeneID: 25485470
NCBI-ProteinID: XP_013470142
UniProt: A0A072W1L5
LinkDB
Position
1:complement(53206447..53212701)
AA seq 836 aa
MHIEEGVEVKRVFIGAGCNRIVNNVSWGASGFVSFGASNAVAIFSPKSAQILTTLPGHKA
VVNCTHWLPSSKFLFKAKELELHYLLSGDADGAIILWELSLVDGKWRQVSQVPQSHKKGV
TCINGIMISQTEAMFASTSSDGTVCIWELVFPLTSSGDCKLSCLDSFSVGSKSMVALSMA
ELPGCTDHIILAMGGLDNKIHLYCGGRTGKFVHSCELKGHTDWIRSLDFSLPVSINGEVN
NIFLVSSSQDKCIRIWKMALCSSVPNGNGIYREEESSLSSYIEGPVLVAGSSSFQISLES
LLIGHEDWVYSVEWQPPLVASTEGEACYQSQSILSASMDKTMMIWQPEKTSGVWMNVVTV
GELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGDDNWLTQKVPSGHFASVTEIAW
ARSGDYIISASHDQTTRIYAPWKVETSLQDGEFWYEIARPQVHGHDINCMTVVHSKGNHR
FVGGADEKVARVFEAPLSFLKTLSNATLQKSCYSDDDLTNIQILGANMSALGLSQKPIYA
QAVHETSDTNGVDGLDTFETVPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSL
CCDHKGELVASSCKAQSTAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVS
RDRQFSVFTITTTGTGEISYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWAVE
KKSSSVRQLMTLPQFTSSVTALSWVALPNRRNDGILAVGMENGQIELWSLSYNRQVDGSI
VVPGFAAALLVRVDPFICHASTINRLAWRKTEEDHKSLQLASCGADNCVRVFDVTV
NT seq 2511 nt   +upstreamnt  +downstreamnt
atgcatatcgaagaaggagttgaagtgaaaagggtattcattggagcaggatgcaacaga
atagtgaacaacgtttcttggggtgcttctggttttgtctcttttggagcttcaaacgcc
gtcgccattttctcccccaagagtgctcaaattttgaccactcttcccggtcacaaagct
gttgtcaattgcactcactggctcccaagtagcaaatttctattcaaagcaaaagaattg
gaactgcattatttgctatctggagatgcagatggtgctattattctatgggaactgtcc
cttgttgatgggaagtggaggcaagtgtcacaagtaccacaatcacacaagaaaggggtt
acatgcatcaatggaattatgatttctcaaactgaggcaatgtttgcatctacttcttca
gatggtactgtttgtatatgggaacttgtatttccactgacgagtagtggtgactgtaaa
ttatcatgcctggactctttttccgttggttctaaatctatggtagccttatcgatggcg
gaactgcctggatgcactgatcacatcatccttgcaatgggaggattggataacaagatc
cacctttactgtgggggaaggactggaaagtttgtacattcatgtgagctaaaagggcac
acagattggatccggagtttggacttctcattacctgtaagcatcaatggggaggtaaac
aatatttttctggtaagttcgtctcaagataaatgcatacgaatttggaagatggcattg
tgcagctctgtgccaaacgggaatggcatatacagggaggaagaatcaagcttatcatcc
tatatagaaggtcctgtccttgtggccggctcatcttcttttcagatatccttagaatct
cttttgattggacatgaggattgggtatattcggttgaatggcaaccccctttggttgca
tccacggaaggggaagcctgttatcagtcacagagcattttatctgcatccatggacaag
actatgatgatctggcagcctgaaaagacttctggtgtgtggatgaatgtggttactgtt
ggcgaactaagtcactgtgctctgggattctatggtggtcattggagtccaaatggagat
tcaattttagcacatggatatggtggatcgttccatctttggaaaaatgttggcgatgac
aactggcttacgcaaaaggttccctctggtcattttgcatcggtgactgagatagcatgg
gctagatctggtgactacattatatcagctagccatgaccagacaactagaatttatgct
ccatggaaagttgagacttctcttcaagatggagagttttggtatgagattgcgcggcct
caggttcatggccatgatataaattgtatgaccgttgttcatagtaagggtaatcaccgt
tttgttggcggagccgatgagaaagttgctagagtgtttgaagctccattatcatttttg
aaaacgttgagtaatgccactttgcagaagtcttgttattctgatgacgacttgacaaac
attcagattttgggtgcaaatatgtcagctcttggactttcacaaaaacctatttatgct
caagctgtacatgagacctctgatacaaatggggttgatggtctggacacctttgaaact
gttcccgatgcagttccaaccgtgtttaccgaacctccaattgaagaccaactagcatgg
cacacactctggcctgaatcacataaactctatggccatggaaacgagctattttcttta
tgctgtgatcataagggtgagcttgtcgcttcttcatgtaaggcccaatctacggctgtg
gcagaggtatggctttggcaggttggttcatggaaagcagttggccgcttgcaatcccat
agcttaacagtgacacagatggaattctcacacgatgacaactttcttttgactgtctca
agagatcgccagttctctgtttttacaatcacaacaacaggaaccggtgaaattagttat
agtcttcttgcgaggcaggagggacacaagcggattatctggtcatgttcttggaaccca
cacggccatgaatttgcaacaggttcacgcgacaagacagtgaaaatctgggccgtagag
aagaaatcttcatcagtaagacagcttatgactttacctcaatttacgagtagtgtgact
gcattgtcttgggttgctctgcctaatcgaagaaatgatggaattctagctgttggaatg
gaaaatggccaaatagaattgtggagtctgtcctataacagacaagtggatggaagcatt
gtagtaccgggttttgctgctgctcttcttgttcgcgtagatccttttatatgtcatgcc
tctacaataaaccgtctggcgtggaggaaaactgaagaagatcacaagagcctacaactt
gcttcttgtggagctgataactgtgtgagagtgtttgatgtaactgtttga

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