Medicago truncatula (barrel medic): 25485470
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Entry
25485470 CDS
T01716
Name
(RefSeq) elongator complex protein 2
KO
K11374
elongator complex protein 2
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
25485470
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
25485470
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_ELP1_2nd
Beta-prop_WDR11_1st
GH97_C
Motif
Other DBs
NCBI-GeneID:
25485470
NCBI-ProteinID:
XP_013470142
UniProt:
A0A072W1L5
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Position
1:complement(53206447..53212701)
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AA seq
836 aa
AA seq
DB search
MHIEEGVEVKRVFIGAGCNRIVNNVSWGASGFVSFGASNAVAIFSPKSAQILTTLPGHKA
VVNCTHWLPSSKFLFKAKELELHYLLSGDADGAIILWELSLVDGKWRQVSQVPQSHKKGV
TCINGIMISQTEAMFASTSSDGTVCIWELVFPLTSSGDCKLSCLDSFSVGSKSMVALSMA
ELPGCTDHIILAMGGLDNKIHLYCGGRTGKFVHSCELKGHTDWIRSLDFSLPVSINGEVN
NIFLVSSSQDKCIRIWKMALCSSVPNGNGIYREEESSLSSYIEGPVLVAGSSSFQISLES
LLIGHEDWVYSVEWQPPLVASTEGEACYQSQSILSASMDKTMMIWQPEKTSGVWMNVVTV
GELSHCALGFYGGHWSPNGDSILAHGYGGSFHLWKNVGDDNWLTQKVPSGHFASVTEIAW
ARSGDYIISASHDQTTRIYAPWKVETSLQDGEFWYEIARPQVHGHDINCMTVVHSKGNHR
FVGGADEKVARVFEAPLSFLKTLSNATLQKSCYSDDDLTNIQILGANMSALGLSQKPIYA
QAVHETSDTNGVDGLDTFETVPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSL
CCDHKGELVASSCKAQSTAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVS
RDRQFSVFTITTTGTGEISYSLLARQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWAVE
KKSSSVRQLMTLPQFTSSVTALSWVALPNRRNDGILAVGMENGQIELWSLSYNRQVDGSI
VVPGFAAALLVRVDPFICHASTINRLAWRKTEEDHKSLQLASCGADNCVRVFDVTV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcgaagaaggagttgaagtgaaaagggtattcattggagcaggatgcaacaga
atagtgaacaacgtttcttggggtgcttctggttttgtctcttttggagcttcaaacgcc
gtcgccattttctcccccaagagtgctcaaattttgaccactcttcccggtcacaaagct
gttgtcaattgcactcactggctcccaagtagcaaatttctattcaaagcaaaagaattg
gaactgcattatttgctatctggagatgcagatggtgctattattctatgggaactgtcc
cttgttgatgggaagtggaggcaagtgtcacaagtaccacaatcacacaagaaaggggtt
acatgcatcaatggaattatgatttctcaaactgaggcaatgtttgcatctacttcttca
gatggtactgtttgtatatgggaacttgtatttccactgacgagtagtggtgactgtaaa
ttatcatgcctggactctttttccgttggttctaaatctatggtagccttatcgatggcg
gaactgcctggatgcactgatcacatcatccttgcaatgggaggattggataacaagatc
cacctttactgtgggggaaggactggaaagtttgtacattcatgtgagctaaaagggcac
acagattggatccggagtttggacttctcattacctgtaagcatcaatggggaggtaaac
aatatttttctggtaagttcgtctcaagataaatgcatacgaatttggaagatggcattg
tgcagctctgtgccaaacgggaatggcatatacagggaggaagaatcaagcttatcatcc
tatatagaaggtcctgtccttgtggccggctcatcttcttttcagatatccttagaatct
cttttgattggacatgaggattgggtatattcggttgaatggcaaccccctttggttgca
tccacggaaggggaagcctgttatcagtcacagagcattttatctgcatccatggacaag
actatgatgatctggcagcctgaaaagacttctggtgtgtggatgaatgtggttactgtt
ggcgaactaagtcactgtgctctgggattctatggtggtcattggagtccaaatggagat
tcaattttagcacatggatatggtggatcgttccatctttggaaaaatgttggcgatgac
aactggcttacgcaaaaggttccctctggtcattttgcatcggtgactgagatagcatgg
gctagatctggtgactacattatatcagctagccatgaccagacaactagaatttatgct
ccatggaaagttgagacttctcttcaagatggagagttttggtatgagattgcgcggcct
caggttcatggccatgatataaattgtatgaccgttgttcatagtaagggtaatcaccgt
tttgttggcggagccgatgagaaagttgctagagtgtttgaagctccattatcatttttg
aaaacgttgagtaatgccactttgcagaagtcttgttattctgatgacgacttgacaaac
attcagattttgggtgcaaatatgtcagctcttggactttcacaaaaacctatttatgct
caagctgtacatgagacctctgatacaaatggggttgatggtctggacacctttgaaact
gttcccgatgcagttccaaccgtgtttaccgaacctccaattgaagaccaactagcatgg
cacacactctggcctgaatcacataaactctatggccatggaaacgagctattttcttta
tgctgtgatcataagggtgagcttgtcgcttcttcatgtaaggcccaatctacggctgtg
gcagaggtatggctttggcaggttggttcatggaaagcagttggccgcttgcaatcccat
agcttaacagtgacacagatggaattctcacacgatgacaactttcttttgactgtctca
agagatcgccagttctctgtttttacaatcacaacaacaggaaccggtgaaattagttat
agtcttcttgcgaggcaggagggacacaagcggattatctggtcatgttcttggaaccca
cacggccatgaatttgcaacaggttcacgcgacaagacagtgaaaatctgggccgtagag
aagaaatcttcatcagtaagacagcttatgactttacctcaatttacgagtagtgtgact
gcattgtcttgggttgctctgcctaatcgaagaaatgatggaattctagctgttggaatg
gaaaatggccaaatagaattgtggagtctgtcctataacagacaagtggatggaagcatt
gtagtaccgggttttgctgctgctcttcttgttcgcgtagatccttttatatgtcatgcc
tctacaataaaccgtctggcgtggaggaaaactgaagaagatcacaagagcctacaactt
gcttcttgtggagctgataactgtgtgagagtgtttgatgtaactgtttga
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