Medicago truncatula (barrel medic): 25485699
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Entry
25485699 CDS
T01716
Name
(RefSeq) elongator complex protein 1 isoform X2
KO
K11373
elongator complex protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
25485699
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
25485699
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
25485699
NCBI-ProteinID:
XP_013470429
UniProt:
A0A072VRS1
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Position
1:55719500..55725922
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AA seq
1149 aa
AA seq
DB search
MEQHPISWRGDGKYFATMSMCGSNLSRKLKIWERDSGALLASSEEKAFAGPVLEWMPSGA
KIAAVYDRKAENESPSVVFFERNGLERSKFSVGEGINAKVRFLKWNCSSDLLAGVVECGN
YEALKIWYFSNNHWYLKHEIRYLKQDEVRFMWNQEKPLQLICWTLGGQVTVYNFVWNTAV
TDNSVALVIDGSNIHVSPLSLSLMPPPMYLFSLKFSSRVRGMAVYCKNSKNQLAAFLSDG
SLCVVELPSIETWEELEGKEFSVEASHTEMVLGSILHLVWLDSHTLLSVSHYGFSHSNDL
FQSSLNEGALRGFYLREIELECSEDIVPGLLTCSGWNATVSKQNTLEELVIGIAPNPASK
YSAYMQFSDGKIKEYLSKIGTGGGSLEQEYQGFSAACPWMDVVLVGSAGQSKPVLFGLDE
IGRLHASGGIVVCNNCSNFSFYSNLADQVVTHLILATKQDLLFIVDIVDIFNGELDSKYG
NFVRSNSRKREENENYIHIWERGAKIVGVLHGDEAATILQTTRGNLECIYPRKLVLVSII
NALAQKRFRDALLMVRRHRIDFNVIIDYCGWQAFSQSAFEFVRQVNNLGYITEFVCSVKS
ENVIETLYKNHVSVPCSEVANVTLAGGLQNFLADNKVSSILMAIRKALEDHFTESPAREL
CILTTLARSEPPLLEDALKRIKVIREKELSHADDHRRMTYPSAEEALKHLLWLADGDAVY
DAALGLYDLKLTAIVALNAQKDPKEFLPFLQELERMPTPLMQYNIDLRLKRFEKALRHIA
SAGDSYYDDCMTLVKKNPQLFPLSLQLFTDPAKRMPFLEAWGDYLSGEKCFEDAATIYLS
CFNLDKALKSYRAINNWSGVLTVAGFLNLGKDEVLHLAGELCEQLQALGKPGEAAKIALE
YCGDVNSGVNLLISARDWEEALRVVFMHRREDLVKVVKDASVECASTLTNEYEEGLEKVG
KYLARYLAVRQRRLLLAAKLQSEKREGSDVEDDAASEASSNFSGMSAYTTGTRKSSATST
LSAATTRARDARRQRKRGKIRPGSADEEFALVDHLKGMSLRVEARRELKSLLVSLMMFGE
GETARKLQQMGENFQLSQMAAVRLAEDTISNDTINEYAHTLEQYTPKVRDEMHDSEALSW
RVKVFLSNE
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacatcctatatcatggcgaggagatggaaaatactttgctacgatgagtatg
tgtggttctaatttatcacggaaacttaagatttgggaacgagattcaggggcattactt
gcttcttcggaggaaaaagcttttgcaggaccagttttggagtggatgccaagtggtgct
aaaattgccgctgtatatgatagaaaagctgaaaatgaatccccctccgttgttttcttt
gagagaaatggattagaaagaagcaaatttagtgttggtgaaggaattaatgcgaaagta
agatttctgaagtggaattgcagttctgatcttcttgctggtgttgtcgaatgtggaaat
tatgaggctctaaagatatggtattttagcaacaatcattggtacctgaagcatgaaatt
agatacttgaagcaagacgaagtcaggttcatgtggaatcaagaaaaacctttgcagttg
atttgttggactcttggtggtcaggttacagtttacaattttgtttggaacacggctgtt
acggataattctgttgcactagtcatcgatggctccaatattcacgtgtcaccactttcc
ttatccttaatgccgcctcctatgtacttatttagcctaaaattttcttctcgtgtacgg
ggtatggcagtatactgtaaaaactccaagaaccagttagctgcatttctttcagatggt
agtttatgtgttgtagagcttccatcaattgaaacttgggaagaactagaggggaaagaa
tttagtgtcgaagcctctcatactgaaatggtgcttggatccatattacatcttgtatgg
ttagattcacatacgctgttatctgtttcacattatggtttcagtcacagcaatgactta
ttccaaagctcactaaacgaaggtgcacttcgaggcttctatttgcgggaaatagaactt
gaatgttccgaggatattgttccaggattgctgacatgttcaggttggaatgcaacagtt
tcaaagcaaaatacacttgaagagcttgttattggcattgctccaaatcctgctagtaaa
tattctgcatatatgcagttttctgatgggaaaatcaaggagtatttatcgaaaatcggc
actggtggcggatcattggaacaagaatatcaaggtttttctgcagcctgcccttggatg
gatgtagtgctggtcggaagtgctggccagtcaaaaccagtgctttttggactggatgag
attggcagattgcatgctagcggggggatagtagtttgcaacaactgcagcaatttctca
ttttactcaaatttggcagatcaagttgtgacacatctaattcttgcaactaaacaagat
ctgctttttattgttgacattgttgatatatttaatggggagttagactcgaagtatggg
aattttgtccgcagtaacagcagaaaaagggaagaaaatgaaaattacatacatatatgg
gagagaggtgctaaaatagttggagttttacatggagatgaagctgccactatacttcaa
actacccggggaaacctagaatgtatataccctagaaaattggttttggtttctatcatt
aatgccttggctcaaaagcggtttagagatgcattgctcatggttaggagacataggata
gatttcaatgtaattattgattactgtggttggcaagcattttcacagtcagcttttgaa
tttgtcaggcaggtcaacaatctgggttacataactgagtttgtttgttctgtaaagagt
gaaaatgttatagagacactctacaaaaatcatgtgtctgttccctgttcagaggttgct
aatgttacgctagctggaggcctccaaaatttcctcgcagacaacaaggtttcttcaatt
ctgatggccataagaaaagcacttgaggaccattttacagaaagccctgctagggagctt
tgcatattaaccacacttgctcggagtgagcctccattacttgaagatgctttaaagaga
ataaaagttatccgtgaaaaggagttgtctcatgctgatgatcacaggagaatgacctac
ccttctgctgaagaagctttgaaacatctgttgtggttggccgatggggatgctgtctat
gatgctgctttgggtctttatgatttaaaactcacagctattgtggcattgaatgcccaa
aaagatccaaaagaatttcttcctttcttgcaagagttggagcgtatgcctacaccatta
atgcaatacaatatcgaccttaggctgaaaaggtttgaaaaggctctcagacatattgct
tctgccggcgattcttattatgatgattgtatgacactggtgaagaaaaaccctcaactt
tttcccttgtctcttcaactttttactgaccctgctaagaggatgccattccttgaggca
tggggtgattatcttagcggtgaaaaatgctttgaagatgctgcaacaatttacttgtcc
tgtttcaatctggataaagctctgaagtcttatcgtgctattaataactggagtggggtg
cttacagttgctgggttccttaatctgggaaaagatgaagtactgcatcttgccggtgag
ctttgcgaacaacttcaagcacttggtaagcccggcgaagctgccaaaattgccctggag
tactgtggagatgttaactctggtgtgaatttattaatttctgcaagggattgggaggag
gctttgagggttgtttttatgcatagaagagaggacttagttaaggttgtgaaggatgca
tctgttgaatgtgcaagcacacttaccaatgaatatgaggaaggcttagagaaagtgggg
aagtacttggcccgttacttggctgttcggcaaagaaggctacttctcgcggcaaagctc
caatcagagaaacgtgaaggtagtgatgttgaagatgatgctgcttcagaggctagcagt
aattttagtggaatgagtgcatacaccacagggaccaggaaaagttctgctacttctact
ctttcagctgcaactaccagggcaagagatgctcggcgtcagaggaaaagaggaaaaatc
cgtcctgggagtgctgatgaggaatttgcgttagtggatcatttgaaaggcatgtctctg
agagtggaagcaagacgagagctgaaatctttgttggtttcccttatgatgtttggtgag
ggtgaaactgcaaggaaactacagcaaatgggggaaaactttcaattgtctcagatggca
gcagtcagattggctgaggatacaatatcaaatgataccataaatgagtatgcacatact
ttggagcaatacaccccaaaagtaagggatgaaatgcacgattcagaggctttgtcgtgg
cgggtcaaagtttttttaagcaatgagtga
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