Medicago truncatula (barrel medic): 25485719
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Entry
25485719 CDS
T01716
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
25485719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mtr02000
]
25485719
04147 Exosome [BR:
mtr04147
]
25485719
04090 CD molecules [BR:
mtr04090
]
25485719
Enzymes [BR:
mtr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
25485719
Transporters [BR:
mtr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
25485719
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
25485719
CD molecules [BR:
mtr04090
]
Proteins
25485719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
Zeta_toxin
AAA_15
AAA_23
AAA_16
HupE_UreJ
Motif
Other DBs
NCBI-GeneID:
25485719
NCBI-ProteinID:
XP_013470450
UniProt:
A0A072VSU0
LinkDB
All DBs
Position
1:complement(55820861..55830101)
Genome browser
AA seq
1396 aa
AA seq
DB search
MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPFMDIGGETSASQQMEAEEEMEEMEDIE
PPPAAVPFSRLFACADRFDWFLMVVGSIAAAAHGTALVVYLHYFAKVIRVPQEQDMFHRF
KELALTIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGD
IVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGG
ISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLSAFTNETLAKYSYATSLQATLRYGIL
ISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAAT
NFYSFDQGRIAAYRLFEMISRSSSSFDHDGSAPVSVQGNIEFRNVYFSYLSRPEIPILSG
FYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGL
VTQEPALLSLSIRDNIAYGRDTTTDQIEEAAKIAHAHTFISSLDKGYDTQIGRAGLALTE
EQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIK
NADYIAVMEEGQLVEMGTHDELLSLGGLYAELLRCEEATKLPKRMPARNYKKTAAFQIEK
DSSESHSCKEPSSPRMMKSPSLQRVSAVFRPSDGFFNLHESPQVQSPPPEKMMENGQSLD
STEKEPSIKRQDSFEMRLPELPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQT
FSRPDSYSDEFSVKMNETKDARHRGQPSFWRLAELSFAEWLYAVLGSIGAAIFGAFNPLL
AYVIGLVVTTYYRIDDTHHLRGEIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERV
RRMMFSAMLRNEIGWYDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDIAAVVVAFL
IGVLLHWRIALVALATLPVLCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVV
AFCAGNKVMELYRLQLNRIFKQSFLHGLAIGFAFGFSQFLLFACNALLLWYTAICINKSY
VEASTALKEYIVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDESSALKP
PNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVSGGQTIAVVGVSGSGKSTIISLMERYYD
PVAGQVLLDGRDLKLYNLKWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAAR
IANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIESES
SRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVR
LMQPHFGKALRQHRLV
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttctagaggtctattcgggtggtcaccaccacatgtgcaaccattaacacct
gtttccgaggtttcggagccgccggagtctccgtcaccgttcatggacatcggaggagag
acttcggcgtcgcagcaaatggaagcggaggaggagatggaagagatggaggatattgaa
ccgccgccagctgctgttcctttctctcggttatttgcgtgtgctgaccggtttgactgg
tttcttatggtggttggttctatcgctgcggcggctcatggaactgcgcttgttgtttac
ttgcattactttgctaaagttattcgcgttcctcaggagcaggatatgtttcataggttc
aaagagcttgctttgaccattgtttatatcgctggtggtgtttttgttgctggttggatt
gaggtttcatgttggattcttaccggagaacggcagacagccgtcatcagatcaaaatat
gttcgagtattacttaaccaagatatgagtttctttgatacttatggaaataacggagac
attgtgagtcaagtattgagtgatgtactgctcattcagtctgcactcagtgaaaaagtt
gggaattatattcataatatggctacattcttcagtggtcttgttattgcttttatcaat
tgttggcagatagcattgataacattggctacaggtccatttattgttgctgcaggagga
atatcaaatatattccttcataggcttgcagagaatatccaagatgcatatgccgaagct
gccagcattgctgaacaggcagtttcctacatacggaccttgtctgcatttacaaatgaa
acattggcaaaatattcatatgcaacgtcactgcaagctactcttagatatggtatatta
ataagtcttgtccaagggcttggccttggatttacatatgggcttgcaatatgttcttgt
gcattacaactctgggttggaaggttcttggttatacacggaaaagctcacggcggggaa
attataacagctctgtttgctgtcattctaagtggcttgggattaaaccaagcggcgaca
aatttctactcatttgatcaagggcgaatagctgcctatagactattcgagatgataagc
cggtcatcctcgtcttttgatcatgacggaagtgctcctgtgtccgtgcaaggaaatata
gagtttcggaatgtatacttcagttatctttcacgccctgaaatccctatcttaagtggg
ttttatctcacagttcctgctaagaaaactgtggcacttgttggcagaaatggttctgga
aaaagtagtattattccactcatggagcggttctatgatccaacattaggagaagttctt
ttagatggtgaaaacatcaagaatttgaaactggaatggctgaggagccaaataggactg
gtcacccaggaacctgctttgctcagtttgagtataagagacaacattgcatatgggagg
gataccaccacggatcaaattgaagaggctgctaaaatagctcatgcacacacctttatc
agttcattagataaaggttatgatacacagattggcagggctggtttagctttgaccgaa
gaacagaaaataaagctttctattgcaagagctgtgcttctaaatccatcaattctcctg
cttgatgaggttactggcggacttgattttgaggctgaaaggtctgttcaggaggctctg
gatctccttatgctggggcgctcaacaataattattgctcgaaggcttagtcttataaaa
aatgctgattatatagcagttatggaggaaggtcaacttgttgaaatgggtactcacgat
gaattattgtccctgggtggcttatatgcagagctacttcgatgtgaagaggccactaaa
cttccaaagaggatgcctgctcgcaactacaagaagactgcagctttccaaattgagaaa
gattcttcagagagtcatagctgcaaagaaccatcatcccctagaatgatgaagtcacct
tctcttcaaagagtttctgctgtatttcggccttcagatggcttctttaacttacatgaa
tcaccacaagtgcagagtccaccacccgagaagatgatggaaaatggtcagtctttggat
tcaaccgagaaagagccctcaataaaaaggcaggatagctttgaaatgagattacccgag
ttacccaagattgatgttcagtcggtgcatcgtcaaacatcaaatggttctgacccagaa
tcccctgtttcacctcttttaacatctgatcctaaaaatgaacgctcccattcacaaaca
tttagcagaccagatagttattctgatgaattttcagtgaaaatgaacgaaacaaaggat
gcacggcatcgaggtcaaccctcattttggagactggcagagcttagttttgctgagtgg
ctttatgctgtgttaggaagcataggcgctgcaatctttggtgcgttcaatccacttctt
gcttatgttatcggcctggtggtgacaacttactatcgaattgacgacactcatcacttg
cggggggagatagacaagtggtgtttgatcattgcctgcatgggtattgtgacagttgtt
gccaactttttacagcatttctactttggtataatgggagagaaaatgaccgaaagagtc
cggagaatgatgttctcagccatgctacgtaatgaaattggatggtacgatgatgaggaa
aacagtgccgacaatttatccatgcgtttggccaatgatgctacgtttgtacgagctgct
ttcagcaacagactttctatatttatacaggacattgctgcagttgttgttgcttttctc
attggtgttttgctgcactggagaatagctcttgtggctttagctacacttccggttctc
tgtgtttctgctattgcccagaaattgtggcttgctggtttttcaaggggcatacaggaa
atgcacagaaaggcatctttggttcttgaagatgcagttagaaatatttacactgttgtt
gcattttgtgctggtaataaggtaatggaactctacaggctgcagttaaatagaatattt
aagcagagctttcttcatggattggccattggttttgcattcggcttttcacagtttcta
ctttttgcttgtaatgcccttctactctggtacactgcaatatgtataaacaagagttat
gtagaagcatctactgcactcaaggagtacattgttttctcatttgctacatttgcactt
gtggagccttttggattggctccttacatactcaagcgacgtaaatctctcatttcagtg
tttgaaattatagatcgcgtgcctaaaattgatcctgatgaaagctcagccttgaagcca
cccaatgtatatggaagcattgagttgaaaaatgttgatttttgttatcctactcggcct
gaagtgctggtattaagcaatttcagtctcaaagtcagtgggggacaaacaattgcagtt
gtgggagtttcagggtcaggaaagagcactattatatctttgatggagagatattatgat
ccagttgctggccaagttttactggatgggagggatttaaaactatataatctgaaatgg
ctaaggagccaccttggtctggttcagcaggaaccaattatcttctcaacaaccataagg
gaaaacatcatatatgccagacataatgccagtgaagctgaaatgaaagaggcggcaaga
atagctaatgctcatcatttcattagtagcctgcctcatggttacgatactcatgttgga
atgagaggtgttgacttaactccaggacagaaacagaggattgcaattgcaagggtaatc
ctgaaaaatgcacctatattgttgttggatgaagctagctcatcaattgaatcagaatcg
agccgagtagtgcaagaggctcttgacactcttataatgggaaacaagactactatttta
atagctcacagggctgccatgatgaggcatgttgacaatatagtcgtgcttaatggagga
cggattgtggaagaggggacccatgattcattggtggcaaagaatggtttgtatgtccga
ttaatgcaacctcattttggtaaggctttgcgtcagcatcggcttgtttag
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integrated database retrieval system
