Medicago truncatula (barrel medic): 25485770
Help
Entry
25485770 CDS
T01716
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
25485770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25485770
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
RNases
25485770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
CEP63
DEDDh_C
BRAP2
RPW8
Motif
Other DBs
NCBI-GeneID:
25485770
NCBI-ProteinID:
XP_024631247
LinkDB
All DBs
Position
1:7806325..7812992
Genome browser
AA seq
550 aa
AA seq
DB search
MDEKIDTAEKKVLVDIVKLVQKKGMKGKMGDWKEFLNSNDKKFGAGMSDPSKRSHEVLAA
FLKTFSKDEDLKFFGNIMRHHSNQYTLERLKDRSQDSPEQRLVQVTLQHPMYPMDYSLPS
IDEGWLVINLKKKAKGIKSTTMVAVDCEMVLCEDGTEALVKVCVVDHNLEVKLHKLVKPE
KAIKDYKTEITGVSAQDLETVTCSLADIQKSMKKLLYNGTILVGHSLYNDLRVLKLDYVR
VVDTAYIFQPLDGSIHRRPSLNSLCQSVLGYEVRKKGASHDCLDDACATMKLVLAKIKHG
VDKPFPLTLVQEPVSESEMSKLLIHRIPTTVNTEALHEIVPGDFTIERKPSRNGQGDKYS
ALAIFKNQREAHDAYENVQGSQTKDSNGRLQKLVTCRLSTGMSVSLFVRKMGIDDHHKKM
PSKRDLPEGEMVDVPENKKVKMDPEVEKDAYLKQIEALNQRLKESELEIESLREQLRKKD
LQVDDSKEVKVDHEIEKDAHLKEIEALNQRLKESEAEIESSREQLRKKDFEITALHKMVA
NIQKRQKPKK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaagattgacaccgcggaaaagaaggtgttggttgatattgtaaaattggta
caaaagaaaggcatgaagggtaaaatgggagactggaaggaattcctgaacagcaatgat
aaaaaatttggggcaggtatgagtgatccatcaaagaggtcccatgaggttttggctgca
tttctaaagacattctcaaaggatgaggatttgaagttttttggtaacatcatgcggcat
cattcaaatcaatacacattagagcgactgaaagatagatctcaggattcccctgagcag
aggctagtccaagtaactctccagcaccctatgtatccaatggattattcgctgccatct
attgatgagggatggttagtgataaaccttaagaaaaaggccaaggggataaaatctacc
acaatggttgctgttgattgtgaaatggttctctgtgaagatgggactgaagctttggtc
aaagtctgtgttgtagatcacaatttagaggtcaaattacacaaacttgttaaaccggag
aaagcaatcaaagactacaaaacagagattaccggtgtctctgctcaagatctagagaca
gtgacttgctccttagctgatatacagaaatcgatgaagaagttgttatacaatggaacc
atattagttggacacagtttatataatgatctacgtgtgctgaagcttgattatgttaga
gtggtcgacactgcatacatcttccaacccttggatggctctattcacaggagaccttcg
ttgaatagtttgtgtcagtctgttttgggctatgaagttcggaaaaagggtgcttcgcat
gattgtctagatgatgcatgtgcaacaatgaaacttgttcttgcaaagatcaaacatggt
gttgataagccatttccattaacattggttcaagagcctgtttcagaaagtgagatgtcg
aagctgcttattcacagaataccaaccactgtgaacactgaagcactacacgaaattgtt
cctggagacttcacaatagaacggaagccttccagaaacggtcaaggagataagtattct
gccttagctatttttaagaaccaacgagaggcacatgatgcatatgaaaatgtccaaggc
agccaaacaaaggactcaaatgggcgtctacagaaacttgtcacatgtcggctgagtacg
ggcatgagtgtcagtttatttgttcggaaaatgggaattgatgatcaccacaaaaaaatg
ccatctaagagagatttaccagagggcgagatggttgatgttcccgagaacaagaaagta
aaaatggatcctgaagttgaaaaggatgcctacttgaaacagattgaagcactgaatcaa
cgattgaaagagagtgagttggagattgaatcattgagagaacagttgaggaaaaaggac
ttacaagtggatgattccaaggaagtaaaagtggatcatgaaattgaaaaggatgcccac
ttgaaagagattgaagcactgaatcaacgattgaaagaaagtgaagcggagattgaatca
tcgagggaacagttgagaaaaaaggactttgaaattactgctctgcataaaatggtagct
aacatacaaaaaaggcaaaaacctaaaaagtag
DBGET
integrated database retrieval system
