Medicago truncatula (barrel medic): 25486505
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Entry
25486505 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25486505
KO
K15082
DNA repair protein RAD7
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25486505
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
25486505
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
LRR_4
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
25486505
NCBI-ProteinID:
XP_013463542
UniProt:
A0A072V6W0
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Position
2:18369443..18375293
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AA seq
700 aa
AA seq
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MSPPTKTTPPSKPIHPLTPTQTTESPSLSSSSAPPRRRSLRLANSEPALTTPEPTTARVS
EPKKQKMDKSNLTASDSEPNPIPNGFVNLRSGKKILKREIVIDDNDSQNNTPKRNKIEVK
NDEVESSGRRKLTREEKGKEPVVVADEKENENNEFGVESEGVVENIVEERNEVPNVVEEA
RNAINNVREERGVRRNMERFRDIARVNASRFAHFVNDESADEDLVQENGVEEERNEVEDW
PGPFSTAMKIIRDREKKWIPFGSDTVQENLIDKIKWKPKTGLEKLGGKLTVPSLQELCIR
ILAKNVDAIVSLEGVPDGLRHRLSQLLCDSRRMNDHFFELLVGGSPTEIRVRDCSWLSEE
HFTKCFEESDTSNLVVLQLDQCGRCLPDYVVVDTLARSPKQLPNLTSLSLGGACRLSDGG
LRALVSSTPTLRSINLSQCSLLTSASLHILAESLKTLLKELYLDHCLGIDAALIVPALME
LENLEVLSVAGIPTVCDTFVKDYIVARGHNMKELILKDCVNLTDASIKVVAEHCPGICRL
DLMNVCKLTDLSMGYLTNGCRALHTLKLCRNTFSDEAIAAFVETNGESLIDLSLNNIKKV
GYHTTLSLASHAKKLHSLDVSWCRTLTDNALGLIVDSCLSLRLLKLFGCTQLTDVFLKGH
SNSQIQLIGLKMTSVLQHVKVPDPHQSALNYSSVSVDLAP
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccaactaaaactacacccccctctaaacccatacaccccctcactcctact
caaaccaccgaatctccttccctttcttcctcctccgctcctcctcgccgtcgcagcctc
cgtctcgctaactccgaaccagccttaactacccccgaaccaaccaccgctagggtttcc
gaaccgaagaaacagaaaatggataaatcaaatcttaccgcttcggattccgaacctaat
ccaataccgaacggttttgtgaacttgcgatcggggaagaaaattctcaaacgtgaaatc
gttatcgatgataatgattctcagaacaacactcctaaaaggaacaaaatcgaagtgaaa
aacgatgaagtagaatctagtggaagaagaaaattgactagagaagagaaagggaaggaa
cctgttgttgtcgctgatgaaaaggaaaatgaaaataacgaattcggtgtggaatctgaa
ggcgtagttgagaatattgtggaagagagaaatgaagtaccgaatgttgtagaagaagct
agaaatgctattaataatgtgagagaggaacgcggtgtgaggaggaatatggaacgattt
cgtgatatagcgagagtgaatgcttcacgtttcgcgcattttgtgaatgatgaaagcgct
gatgaggatttggtgcaggaaaatggagtagaagaagagaggaatgaggttgaagattgg
cctggtccattttcaactgcgatgaaaatcattagggatcgagagaagaaatggattcca
tttggttctgatactgtgcaggagaatttgattgataagataaagtggaaaccgaaaacg
ggtttggagaagttaggtggaaagttaactgttccgtcattgcaagagctttgtattagg
atacttgctaagaatgtggatgcgattgtttcgcttgagggtgtgccggatggtttgagg
cataggcttagtcagttgttgtgtgattcgagaagaatgaatgatcatttctttgaactt
cttgttggtggaagtccgaccgagattcgggttagagactgctcgtggttgtccgaggaa
cattttactaagtgctttgaagaaagtgatacttctaatttggtggtactgcaacttgac
cagtgtgggcgctgtttgccggattatgtggtagttgatactttagcaaggtcaccaaag
cagttacctaatttaacaagtctatcccttggtggtgcatgtcggctctcagatgggggg
ttgcgagcacttgtttcttctactccaacacttagatcaataaaccttagccagtgctcg
cttctcacatctgccagtcttcatattttggctgaatcattgaaaactcttttgaaagag
ttgtaccttgatcactgccttggcattgatgctgcactaattgtgccagcactgatggag
cttgaaaatttagaagtgttgtcagtggctggcattccaactgtttgtgatacctttgta
aaggattacattgttgcacgtggtcacaacatgaaagagcttattctgaaggactgcgta
aacttgactgatgcatcaatcaaagttgttgctgaacattgtcctggaatatgtcggctt
gatctgatgaacgtgtgcaaattaacagatttgtccatgggatatcttacaaacggttgt
cgtgcacttcatacactgaagctttgccgtaacacattcagtgatgaagcaattgctgca
tttgtggagactaatggagagtccttgatagatttatcgcttaataacatcaaaaaggtt
ggttatcacacgaccttatcacttgcaagccatgcaaaaaaattgcatagtctagatgta
tcttggtgccgaactttgaccgacaatgcattgggtttgatagtggatagttgcttgtca
cttagattgcttaaactcttcggatgcactcagttaacagatgtttttctgaagggccac
tcgaactcacagatccagttaattggcctaaaaatgacttctgttttgcaacatgtcaaa
gtgccggatcctcatcaaagcgctttgaattattcgtcagtctctgtagatttggctccg
tag
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