Medicago truncatula (barrel medic): 25487392
Help
Entry
25487392 CDS
T01716
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25487392
Membrane trafficking [BR:
mtr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
25487392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
bL31_N
Motif
Other DBs
NCBI-GeneID:
25487392
NCBI-ProteinID:
XP_013464760
UniProt:
A0A072VKX8
LinkDB
All DBs
Position
2:39894536..39907781
Genome browser
AA seq
1257 aa
AA seq
DB search
MANFLAQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEARLPFKRASLNNKTRNPVLVDKL
PAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKSILKPRLKLIVQNDER
EWFIVFVSKAHPANDQANKMAKKVYAKLEVEFSSRKRERCCKYDMHFPEAHFWEDLESKI
MECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDALREY
DELELCYLETVNMTGKQRNFGGADHGDDQAAIINPGNKALTQIVQEDSFREFEFRQYLFA
CQSKLLFKLNRPIEVASRGYSFILSFSKSLALHERILPFCMREVWVITACMALIEATTSN
YSDGLVAPDVEKEFFCLLGDLYSLARVKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKP
AVWPSVPADASAEVLEKEKLILQTTPRIKHFGIQRKPLPLEPTVLLREANRRRASLSAGN
ALEMFDSRQGPMEGSGFDASPKMSPQKVLSGSMPRTNSSPGNFDSSISRPMRLAEIYIAA
EHALKQTISNLEMLKSLSSSEEFEKKYLELTKGAADNYHNSWWKRHGVVLDGEIAAVAFK
HGHFDQAAKSYEKVCALYSGEGWQELLAEVLPILAECQKILNDQAGYLLSCVRLLSLEDG
LFLTKERQAFQAEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDKDPGILSVTVCS
GFPDDITLDSISLTLMATSNADEGAKALKSSTAIVLHPGRNTITLDLPSQKPGSYVLGVL
TGQIGQLRFRSHGFSKVGPTESDDVMSYEKPAKPILKVSKPRALVDLDAAVSSALLINEH
QWVGILVRPLNYSLKAAVLHIDTGPGLEIEETHIIEMESYAGVSENDDVEVQKDGAQIDS
LNSEKKFERSNLNDGKIVFPNWASDTPSILWVLIRAISDTLNRGSSSVTTRRESIVDGMR
TIALKLEFGAFHNQIFERTLAVHFTHPFYVRTRVTDKCNDGTLLLQVILHSEVKAVLTIY
DAWIDLQDGFVHSGQTEGRPKSSFFPLIISPTSKAGILFSIFLDKTNAEEAMKQPESILN
IKYGISGDRTIGAHPPFINESTGVDGARQELIFKSVIVLQRPVLDPCLAVGFLPLPSDGL
RVGQLVKMQWRVERLKDLNEREISEQNDEVLYEVNANSGNWMIAGRKRGHVSLSKNQGAR
IIITVLCMPLVAGYVRPPLLGLPEIEEANIRCKPSGPHLVCVLPPTLSSSYCVPVNS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggctaacttcctcgctcagttccaaaccattaaaaactcttccgatcgcctcgtcatt
tcagtggaggacgtgagtgacttgtggccgactgtaaaacctgcttttgaagcgcggttg
ccgtttaaaagggcgagtttgaataacaagacgaggaaccctgttttggttgacaagttg
ccggcagagttcatattaactacagattcaaggctccgtagtcggtttcctcaggagcag
ttgttgttctggtttcgagagccgtatgcaactgttgtgcttgttacctgtgaggatctt
gatgagtttaaaagcatccttaaaccacgcctgaaattaattgtccagaatgatgaaagg
gaatggtttattgtatttgtatctaaagctcatccagctaatgatcaggcaaacaaaatg
gcaaagaaagtatatgctaaacttgaagttgagtttagctccagaaaaagagaaagatgc
tgcaaatatgatatgcatttccctgaagcacatttttgggaagatctggaatcaaagata
atggaatgcatcagaaatacactggataggcgtgtacaattttatgaagatgagatacgg
aagctcagtgaacagcgcctcatgccagtctggaacttctgtaattttttcattctgaag
gaaagtttggcttttatgtttgaaatggcccaccttcatgaagatgccttgcgggaatat
gatgaactagaactttgctatcttgaaacagttaacatgactggaaagcaaagaaacttt
ggcggggcagaccatggtgatgatcaggcagcaattattaatccaggaaacaaagcattg
acgcagatcgtccaagaggattcatttagggagtttgaattcagacagtatctgttcgcc
tgtcaatcaaagctcttattcaagctaaatcgacctattgaggtagcttcaagaggctat
tcattcatattaagcttctcaaaatcgttggcattgcatgagcgtattctgcctttttgt
atgcgtgaagtctgggtgatcactgcttgcatggctttaattgaagcaaccacttccaac
tatagtgatggacttgtggcacctgacgtagagaaggagttcttttgtcttcttggtgac
ctatattctctagccagagtcaagttcatgaggctagcatatttaattgggtatggaact
gatatagaaagaagtcctgtcaacagtgcttccctcagcttgttaccttggcctaagcca
gctgtttggccttcagttcctgctgatgcatcagcagaggtgcttgagaaagaaaagttg
attcttcaaacaactcctagaatcaagcacttcggtatccagagaaagcccctgcctctt
gaacctactgtgcttctacgagaggccaacaggcggagggcatcactttccgccggaaat
gcgttggaaatgttcgacagtcgccagggtccaatggaaggatcaggttttgatgcatcc
cccaagatgtcaccacaaaaagtactttctggttccatgccacgcactaattcttctccg
ggaaactttgatagctcaattagccgaccaatgaggcttgctgagatttatattgctgcc
gaacatgctttgaagcaaacaatttctaatcttgagatgttaaaatcattatcttcgtcc
gaagagtttgagaaaaaatatttagagctaactaaaggtgctgctgacaattaccacaat
tcctggtggaaaagacatggagttgtccttgatggtgagatagctgctgttgcctttaaa
catggacattttgaccaagctgcaaagtcatatgagaaggtttgtgcgttgtattctggg
gaaggatggcaggagttgttggctgaggtcctccccattctagcagagtgtcagaagatt
cttaatgatcaagctggctacttgctatcctgtgtgcggttactttctcttgaagatgga
ttatttttgacgaaggagcgtcaagcttttcaggcagaagtggttcgtcttgctcatagt
gaaatgaaggaccctgtacctcttgatgtatcatcattaattacattttctgggaatccc
gggcctccattggagctgtgcgataaggatcctggtatcctctcggtaactgtctgcagt
ggttttccagatgatataactcttgactcaatcagtcttacattaatggcaacatctaat
gcagacgaaggtgcaaaggcattgaaaagttctacagctatagtgttacatcctggtcgg
aatactattaccttggatctaccatctcagaaaccaggatcgtatgttcttggagttctt
actgggcagattgggcaattgaggtttagatctcatggtttttcaaaagttggtcctaca
gaaagcgatgatgttatgagttatgaaaagccagctaagcccattttgaaggtttccaaa
cctagagcccttgttgatcttgatgccgctgtttcatctgctttgttaataaatgaacac
caatgggttggcattttagttcggccattaaattactccctcaaggctgctgtcttgcat
attgatacgggtccaggattggagattgaagagacacacataattgagatggaaagctat
gctggtgtatcagagaatgatgatgtcgaggtgcagaaagatggtgctcagatagattct
ttaaattctgagaaaaagtttgaacgatcgaatctaaatgatggtaaaatagtgtttccg
aattgggcaagcgacactccttctatactttgggttctaattcgtgccatcagtgacaca
ctcaacagaggatcatcttcagtcacaacaaggagagagagtattgtagatggaatgaga
acgatagctttaaaacttgaatttggagcattccacaatcagatatttgaaaggacccta
gcagtgcattttacacatcctttctatgtgaggacacgtgttacggataaatgcaatgat
ggtacactgcttctgcaggtaatacttcactctgaagtaaaggctgtgttgaccatatac
gatgcttggattgatcttcaagatggatttgttcattctggacaaactgagggtagacct
aaatcaagcttcttcccactaatcatatctcccacttccaaagcaggaattttgttcagt
atcttcctagacaagacaaatgcagaagaagccatgaagcaaccagaaagcatattaaat
atcaaatatggaatttctggtgatagaacaatcggagcccatcctccttttataaatgaa
tctactggagttgatggtgctagacaggagttgatcttcaagagtgtaattgttttgcaa
aggcctgtgcttgatccgtgcctcgccgttggatttcttcctctcccttcagatggccta
agagttggacaacttgttaagatgcaatggagggtggaaaggttgaaagatttgaatgag
agagaaatttctgaacagaatgatgaggttctgtacgaggtaaatgcaaattctggaaat
tggatgattgctggaagaaaaagagggcatgtatctctctccaaaaatcaaggtgcaaga
ataattatcacagtattatgcatgccactagtggcgggttatgtgcgtcctcctctactt
gggttgccagaaattgaagaggcaaatataaggtgcaaaccgtctgggccacatctagtt
tgtgttttgccaccaacgctcagctcatcctactgtgttccagttaattcatga
DBGET
integrated database retrieval system
