KEGG   Medicago truncatula (barrel medic): 25487494
Entry
25487494          CDS       T01716                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
mtr  Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mtr03400]
    25487494
DNA repair and recombination proteins [BR:mtr03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    25487494
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 UBA_Rad5 MEIOC NRho zf-P11 zf-Di19
Other DBs
NCBI-GeneID: 25487494
NCBI-ProteinID: XP_024633078
LinkDB
Position
2:41953157..41962946
AA seq 1016 aa
MGSKVTDPNLSTVRSIVGSEFTDMEIIRALHLAKNDVTSAINIIFDTQRVSLPKSTPRAS
NTQRGSPPNSTPRAVVPGAVTATATSKSNANAENNKCSVELESKDWWFVGSGEVAGLSTC
KGRNIKAGDKVIFKFPPKKVSVSPSPGKGFGRAAASCSEIVRFSNEQDWEIGRIPNEWAR
CLLPLVRDNKVRVEGKCEFAPNVLGIMDSINLSISVFINRSMFVKHHQVSLKDATNSTDE
SVFHPLPALFRLLGLSPFKKAELTPGDFYSNKRPFSQTATLLHAKSEHPSQNGNENEDED
SVSEFDLDNIVGVASSSELEEMDPPGNLLCELRPYQKQALHWMVQMEKGRARDETATTLH
PCWEAYRLADKRELVVYLNAFSGEATTEFPSTLQMARGGILADAMGLGKTIMTISLLVAH
SGKGGSLGSQPIAQSFIEGGEVSDTDTIPNLSKVPKKTTKFTGFDKSTKKNTSLTSGGNL
IICPMTLLGQWKAEIETHVHPGTLSLYVHYGQGRPKDAKSLAQCDVVITTYGILASDFSS
ENGENNGGLFSIRWFRVVLDEAHTIKSSKSQVSMAASALIADNRWCLTGTPIQNNLEDVY
SLLRFLRIEPWGHWAWWNKLIQKPFEGGDERGLKLVQSILKPIMLRRTKHSTDREGKPIL
VLPPADMQIIYCEPTEAEKDFYEALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCC
DHPFLVMSRGDTQEFADLNKLAKRFLRGTCNASEGEVKDALSRAYVQEVVEELRKGEQGE
CPICLEAFEDSVLTPCAHRLCRECLLASWRNSTSGLCPVCRKTVSKQDLITAPTESRFQI
DIEKNWVESCKVTGLMNELENLRSSGSKSIVFSQWTAFLDLLQIPFTRNKISFVRLDGTL
NLQQREKVIKQFSEDSDIQVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIH
RIGQTKKVAIKRFIVKGSVEQRMEAVQARKQRMISGALTDQEVRSARIEELKMLFT
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggggagcaaggtcaccgaccccaatctctccaccgtccgatccatcgtcggttccgaa
ttcaccgacatggaaatcatcagagccttacacttggccaaaaacgacgtcacttccgcc
atcaacatcatcttcgatactcaacgagtttctcttccaaaatccactccacgcgcttcc
aacactcaacgaggttctcctccgaattcaaccccacgcgccgtcgtcccaggcgctgtc
actgccactgccacctccaagagcaacgctaatgcagaaaacaataaatgctccgtcgaa
ttggaatccaaagattggtggtttgtcggttcaggcgaagtggcggggttgtccacttgt
aaagggaggaatataaaagccggtgataaagtaatttttaagtttccacccaagaaggtt
tcggtttcgccgtctccgggaaaaggtttcggtcgagcagcggcaagttgttctgagata
gtgagattttctaatgaacaagattgggagattggtagaataccgaacgaatgggctcga
tgtttattgccattggtgcgggataataaggttagggttgaagggaaatgtgaatttgcg
cctaatgtgttgggtatcatggattctatcaatttgtcaatcagtgtcttcatcaatagg
tcaatgtttgttaagcatcatcaggtttctcttaaggatgctacgaattcgacagatgaa
tcagtgtttcatcctcttccagccctgtttcgattgcttggcctgagccctttcaagaag
gcagagttaactcctggcgatttctattccaacaagcgtcctttcagtcaaacggccaca
ttactacatgccaagtctgagcatccttctcaaaatggtaacgagaatgaagacgaggat
tctgtttctgaatttgatcttgacaacattgttggtgttgcatcaagttcagagttagag
gaaatggacccccctggaaatcttctctgtgaactgcgaccctatcaaaaacaggctctt
cattggatggttcagatggagaagggacgggcaagggatgagactgcaacaacccttcat
ccatgttgggaggcatatcgcctggctgacaagagggagcttgttgtttatttgaatgca
ttttctggtgaagccacaacagaatttcctagcacccttcaaatggccagaggagggatt
ttagcagatgctatggggcttggaaagaccatcatgaccatatcacttctcgttgcccat
tcaggaaagggtggatcattaggcagtcaacctatcgctcagtcctttattgaaggtggt
gaagttagtgacactgatacaattccaaatctttcaaaggttccaaagaagacaaccaaa
tttactggttttgataaatcgacgaagaaaaacacttctctaacaagcggtggcaacttg
ataatatgtcctatgactcttcttgggcagtggaaggcagagattgaaactcatgtgcac
cctgggactctgtctttatatgttcattatggacaaggtaggcccaaagatgctaaaagt
ctagctcaatgtgatgttgtaattactacatacgggattttggcctctgatttttccagt
gagaatggagagaataatggtggactcttctcaattcgttggttcagagtggttcttgat
gaggcacatactataaaatcttctaaaagccaagtttctatggctgcctctgctctaatt
gctgacaatcgctggtgtcttactgggactccaatccagaacaaccttgaggatgtttac
agtcttctccgctttctgagaatagagccttggggtcattgggcctggtggaacaagctt
attcagaaaccatttgagggtggtgatgagagaggattgaaattagttcagtccattttg
aagcctatcatgttgaggagaaccaaacatagcacagatcgagagggaaagcctatatta
gttctccctcctgccgatatgcagataatttactgtgaacctacagaagctgaaaaggac
ttttatgaggccctattcaaaagatctaaggtaaaatttgaccagtttgttgagcaagga
cgcgttcttcataattatgcttcaatactagagctgcttttacgtcttcggcaatgttgt
gaccatccatttcttgtaatgagtcgtggtgatactcaagaatttgctgacctaaacaaa
ttagcaaagcgcttccttagaggaacctgtaatgcttcagaaggtgaagtaaaagatgca
ctctcacgagcttatgttcaagaagttgtggaagagctacgtaaaggggagcagggagag
tgtccaatatgtcttgaagcattcgaagattcagtgttgacgccctgtgctcaccgcctt
tgccgggaatgcctcttggcaagttggcgaaattctacctctggtttatgtcctgtttgt
aggaaaacagtcagcaagcaggatcttatcactgcccctaccgagagtcgatttcagatt
gatattgagaagaattgggtagagtcatgcaaggtaactggtcttatgaatgaacttgaa
aatcttcgctcatcaggatccaagagcattgttttcagccagtggactgcttttctagac
ctcttgcagattccctttactcggaataaaatttcatttgttcgtcttgatgggacattg
aatctgcagcagcgggaaaaagtaatcaaacaattctcagaagacagcgacatacaggtg
ttgttgatgtcacttaaagctggtggagttggtataaatctaacagcagcttccaatgct
tttgtcatggatccatggtggaatccagctgttgaggaacaagctgttatgcgtattcat
cgcattggacaaacaaagaaggtggccatcaaacggtttattgtgaaggggtcagtggag
cagagaatggaggcagtgcaagcacgcaaacaacgaatgatttctggtgccttgactgat
caggaagttcgatctgcacggattgaggagttgaagatgctttttacttag

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