Medicago truncatula (barrel medic): 25487609
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Entry
25487609 CDS
T01716
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25487609
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
25487609
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Gene cluster
GFIT
Motif
Pfam:
Gar1
GP17
RPN11_C
Motif
Other DBs
NCBI-GeneID:
25487609
NCBI-ProteinID:
XP_013465041
UniProt:
A0A072VBT2
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Position
2:complement(44269435..44272580)
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AA seq
631 aa
AA seq
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MDNDDDVFALADSFINFDYAPDSPPPLSDPPVACSGVENEVNENVEIIDAVVRSEIISND
DEIRGDIITNNYDGTQMIDIRDEIIANDDGNEMDSDSSWIERTESEEYEYEEGEIVDSNS
EDKEDDSEETTSWCFDVGGDNDDDQSQSQESRTNELENLSRVPPVNVNLGPHHKMLPVGV
VTSIVGVRVIVEGVEKHDPLNEGSILWITERQTPLGLIDEVFGQVKNPYYVVRYNSEKEV
PEGIREGTLISFVAEFVNHVLNNKDLYKKGYDASGQYDEEVSDEEEFSDDEKEAEYKRLV
KQNKRGRNNQSTDRRMENNRKQVPLKDGSITTMSIAHAGSSVAHGHCPPIQATGQGFIGA
AHGHSSPLPCTRQSFFGSTNVNPPFPHANGGPNVFTTGVWPNGGTLPPQQSAMYPENTQI
SQQLPMQGIPLQQQLPMQGIPFQQQFNPSQRFPPPTTYPGGQLNMYADPMHAQGPINQNQ
WTPIPQFQAPMNFNPNHISGHQGVPWLQFNQPANINPNRIAGNQGGPSLQFNQPANINPN
HIAGNQGGPPFQFNPPANFHSNHISGNQGGPPHQFNPPSNFHAVSISDNQHPPQFHHQFN
PGAYDGPGRAFSASRGRRPFHRGGRGWRPAR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgacgacgacgttttcgccctcgccgattccttcattaattttgattatgcc
cctgattcccctcctcctctttcggatcctcccgttgcgtgttccggtgttgaaaatgaa
gttaatgaaaatgtcgagattattgatgctgttgttagaagcgagattatctctaatgat
gatgaaattagaggcgacattattactaataactatgatggtactcaaatgattgatatt
agagatgagattattgccaatgatgatggtaatgaaatggatagtgatagtagttggatt
gaaagaaccgagagtgaggagtatgagtatgaagaaggcgagatcgttgattctaattct
gaagataaagaagatgattccgaggaaacgactagctggtgctttgatgttggcggcgac
aatgatgatgatcagtctcagtctcaagaaagtagaacgaacgagcttgagaatctctct
agggtccctcctgtgaatgtaaacttgggaccacatcataaaatgctgcctgtgggggtt
gttacatcgattgttggtgttcgagtcattgttgaaggggtggagaagcatgaccctctt
aatgagggttccattctttggattactgaaaggcaaacacctcttggcttaattgatgag
gtctttggtcaagtaaaaaatccttattatgttgtgcgatacaattctgaaaaagaagtt
ccagaagggatccgtgagggaactttgatttcttttgttgcagaatttgtaaatcatgtg
ctaaataacaaggacctttacaagaaaggatacgatgcatctggtcagtacgatgaggag
gtgtctgatgaagaagaattttcggatgacgagaaagaggccgagtacaagagactggta
aaacaaaataaaagaggtcgaaacaatcaaagtaccgacaggaggatggaaaacaacagg
aagcaagttcctctaaaagatggttccatcactacaatgtctattgcacatgccgggtca
tctgttgctcatggtcattgtccacctattcaggccactgggcaaggctttattggtgct
gcccatggtcattcttcacctcttccatgcactagacaaagcttttttggttcaactaac
gtgaatccaccatttccacatgcaaatggtggtcctaacgtgtttacaactggagtttgg
ccaaatggggggacccttccgccacaacagtctgcaatgtatccagaaaatactcaaatt
tctcagcagttgcccatgcaaggaattccgcttcaacagcagttgcccatgcaaggaatt
ccgtttcaacaacagttcaacccaagccaaaggtttcctccaccgactacatatcctgga
ggacagctcaatatgtatgcagatcccatgcatgcacaagggcccattaatcaaaaccaa
tggacacccattcctcagtttcaggcacctatgaattttaatccaaatcatatttcaggc
catcaaggtgttccttggctccaattcaaccaacctgccaatattaatccaaatcgtatt
gcaggcaatcaaggtggtccttctctccaattcaaccaacctgccaatattaatccaaat
catattgcaggcaatcaaggtggtcctcctttccaattcaacccaccagccaattttcat
tcaaaccatatatctggcaatcaaggtggtcctcctcaccaattcaaccccccatcaaat
tttcatgctgtttcaatttcagataatcagcatcctccgcaattccatcatcaatttaat
cctggtgcttatgatggccctgggagagcattttctgctagccgtggaagaagaccattc
catcgaggtggtagaggttggcgaccagccagataa
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