Medicago truncatula (barrel medic): 25487934
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Entry
25487934 CDS
T01716
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25487934
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
25487934
Membrane trafficking [BR:
mtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
25487934
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
25487934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
WD_LRWD1
TPR_2
TPR_1
TPR_12
ChlI
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
25487934
NCBI-ProteinID:
XP_013465538
UniProt:
A0A072VDQ5
LinkDB
All DBs
Position
2:50159765..50170601
Genome browser
AA seq
917 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKCVDLHPTEPWILASLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYLKSSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWAKHNEIQTVNIKSIGAGLEVADGERLPLAVKELGTCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSTDGEYAVRESTSKIKIFSKSFQ
EKKSVRPTFSAERIFGGTLLAICSNDFICFYDWAECRLIYRIDVNVKNLYWADSGDLVTI
ASDTSFYILKYNRDVVASHIDSGRPVDEEGVEDAFELLHEMNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVVGYTLLLSLIEYKTLVM
RGDLESANEVLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFDLAIQLGRLEVAKG
IAIEVQSESKWKQLGELAMSSGKLQMAEECLNHAMDLSGLLLLYSSFGDAEGISKLATLA
KEQGKNNVAFLCLFMLGKLEDCLQLLIESNRIPEAALMARSYLPSKVPEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFEDWQVALAVESKAAETRNVYPPAEQYINHADKSHVTLVEAF
RNMQIEEEEPLENGDSNHELTEQNEEHYTEEEHYTEEQNGEEGSQEEAVVVDAESTDGAV
LVNGNEADEEWVLAPHH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgaaatcaagcgtaagcttgcgcagagatcagaaagagtgaaatgt
gtggatctacatccaactgaaccatggattttggcaagtttatactctggaactgtctgt
atctggaactaccaatctcagactatggccaaatctttcgaggtcactgagttaccagtt
agatcagcgaagtttgttgcacgcaaacagtgggttgttgctggagcagatgatatgttt
attcgtgtatataattacaacacaatggataaagtcaaagtatttgaagcacatacagat
tacattagatgtgtggcagttcatcccacccttccttatgttctgtcgtcatctgatgat
atgctcataaagctttgggattgggaaaaaggctggatttgtacccagatattcgaagga
cattctcattatgttatgcaagtgacatttaatcctaaagacacaaacacctttgccagc
gcgtctcttgatcgcaccataaagatttggaatcttggatctcctgatcccaattttaca
ttggatgctcaccagaaaggagtgaattgcgttgattactttacaggcggtgacaaacct
tatctaatcactggttctgacgatcacactgcaaaggtatgggattatcagaccaaaagt
tgtgtccagaccctagacggtcacacacacaacgtttctgctgtatgctttcatcctgaa
cttcctataatcattactggttctgaggacggtacagtgcgcatatggcactcaacaact
tataggctcgagaatacattgaactacggtcttgaaagagtttgggctattggatacttg
aaaagttcacgtcgggttgtgattggatatgacgaaggaacgattatggtcaaacttggt
agagaagtacctgtagctagcatggacaacagtggaaaaattatttgggctaaacataat
gaaattcagacagtcaatataaagagcataggagcaggtttggaggttgctgatggagaa
aggttacctttggctgttaaggagctgggtacttgtgatctttacccacaaaatttaaaa
cacaatccgaatggaaggttcgttgttgtatgtggagatggtgagtatattatatacact
gcactggcatggagaaacaggtcatttggttcagcgctagagtttgcatggtctacggat
ggagaatatgctgtcagagaaagtacatcaaaaattaaaattttcagcaaaagtttccag
gaaaagaagagtgtacgaccaacattttcggccgaacggatatttggcggcactttactg
gcaatatgttcgaatgatttcatctgcttttatgattgggctgaatgcaggttgatttac
cgcattgatgtcaatgtgaaaaacctctactgggctgatagtggcgatctagtaacaatt
gctagcgatacatcattctacatcctgaagtacaaccgtgatgtagttgcatcccatata
gatagtggaagaccagtagacgaggaaggtgttgaagatgcttttgagctccttcatgaa
atgaatgaacgtgtaaggacgggtatctgggttggggattgctttatctacaacaattcc
tcttggagacttaattactgtgttggcggagaggtaactacaatgttccatttggaccgc
cctatgtacttgttgggatatcttgcaaaccaaagtcgagtgtttttgattgacaaagaa
tttaatgttgtgggatacacactgcttttgagcttgattgagtacaagacacttgtgatg
cgtggtgatttggaaagtgccaacgaagttctaccatcaattcccaaagagcatcataac
agtgttgctcgatttctggaatcacgggggatgatagaggatgctcttgaagtagctaca
gaccctgactacagatttgatctagcaatacagcttggtagattagaagttgcaaaggga
attgcgatagaagtgcagagtgagtctaaatggaagcagttgggagaattagctatgtct
tctggaaagttgcaaatggctgaggaatgtttgaatcatgcaatggatttgagcgggttg
ttgctgctatattcttcatttggagatgctgaaggaatttcaaaacttgcaacccttgct
aaggagcaagggaagaacaatgttgcatttctttgcttatttatgttgggtaaactcgaa
gactgccttcaactattgatagaaagcaatcgaattccagaggcagctttaatggctcga
tcttatctcccaagtaaggtcccagagatagtggcaatttggcgtaaagatctaaataag
gttaatccaaaagctgctgaatcattggctgatccggaggaatatccaaatttgtttgaa
gattggcaagttgcacttgctgttgaatctaaagctgcagaaacaaggaatgtttaccct
ccagcagagcagtatatcaaccatgctgacaaatcacatgttacccttgtcgaagctttc
agaaacatgcagattgaagaggaggagcctcttgagaatggagactctaatcatgagttg
actgaacaaaatgaagaacactatacggaagaagaacactacacggaggaacaaaatgga
gaggaaggaagccaagaagaggcagttgtcgtggatgccgaatcaacagatggtgcagta
ctcgtaaacggcaacgaggctgacgaagagtgggtgcttgcaccacatcactag
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