Medicago truncatula (barrel medic): 25488181
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Entry
25488181 CDS
T01716
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25488181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25488181
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
25488181
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
25488181
NCBI-ProteinID:
XP_013463305
UniProt:
A0A072V6S6
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Position
2:14741820..14748548
Genome browser
AA seq
1042 aa
AA seq
DB search
MASSSKRPAPTGILPEEGRKKLKLSSDSLPCLTHGDVVDYSSPYAISNVINRLESGKFGS
VTKNIEDLITQKMQILGPYFAKCPRLVNQLLRVVTDHDEETPNMENKNVNGLQHDNVIDL
DSDGEHTEKDILAPKRGYNVTAVPFIIDSDEEDDKDHGHDTVPTDHDEETPYIESEKAAG
MSYENVTIDSNEEDDRDQKKDILAPKRENDVPPAPFHEVIIIDSDEEDDRDHDEETPNME
NEKVTGLSCQNVIIDSDEEDDRNHDEETPNMENEKVTGMSCQNVIIDSNGEDDRDQTSFL
PFHEVALPKPVQSPALEMIGYHDPNAYHGEHADLKFETSLLPKDNSKKDKGNYVGVHVEE
DNKELETSLSPEDNTKKDKGVYVGVSEEEDNKVDTEDDGLEDVWREMAMAMETSKDVSAD
QPPEEEENDADCDHSFILKDDLGYVCRVCGVIDRGIETIFEFQYKVKKSTRTYMSESWNA
KEKADIFGVKIAKDDLSVTEISAHPQHANQMKPHQVEGFNFLVSNLVGDHPGGCILAHAP
GSGKTFMVISFIQSFLEKYPDARPLVVLPKGILSTWKKEFLTWQVEDVPLYDFYSVKADS
RSQQLEVLKQWVDNKSILFLGYQQFSSIICDNCSNNTSISCQDILLKKPSILILDEGHTP
RNENTDTVQSLAKVQTPRKVVLSGTLYQNHVKEVFNVLNLVRPKFIKMETSKPIVQRIRS
RIHLPGVKDFCDLVENTLQKDPDFKRKVAVIHDLREMTSKVLHYYKGDFLDELPGLVDFT
VVLNMTPRQKHEVKTIKRVFRKFKASSVGSAVYLHPDLKPIAEKCSENSISEHTMDDLIA
NQDVRDGVKLKFFRNMLNLCQSAGEKLLVFSQYLLPLKYLERLAMKWKGWSLGKEIFVIS
GESSTEQRECSMEKFNNSPEAKIFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIG
RAFRPGQKRKVFVYRLIAADSPEEEDHSTCVKKELISKMWFEWNEYCGDKAFEVETVDVK
ECGDMFLESPLLGEDVKALYKR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctccagtaaacgccctgctccaaccgggattttgcctgaagaaggacgcaaa
aaacttaaactgtcaagtgatagcttgccatgtttaacacatggtgatgttgtagattac
agcagtccgtatgcaatttcaaatgttataaatcgcttagagagtggaaaatttggaagt
gtgacaaaaaatattgaagaccttataacccagaaaatgcaaatattgggcccttacttt
gcaaaatgtcctagacttgttaatcaactattgagagtggtgacagatcatgatgaagaa
actcccaacatggaaaataagaacgttaatggtttgcaacatgataatgtcatagatttg
gattcggacggggagcacactgaaaaggatattttggcaccaaaaagaggatataatgtt
actgcagtaccatttatcattgattcagatgaggaggatgataaggatcatggtcatgat
actgttccaacagatcatgatgaagaaactccctacattgaaagtgaaaaagctgctggt
atgtcctatgaaaatgttaccattgattcaaatgaggaagatgatagggatcaaaaaaag
gatattttggcaccgaaaagagaaaatgatgttcctccagcaccatttcatgaagtcatt
atcatcgattcagacgaagaagatgatagggatcatgatgaagaaactcccaacatggaa
aatgaaaaagttactggtttgtcctgtcaaaatgttatcatcgattcagatgaggaagat
gataggaatcatgatgaagaaactcccaacatggaaaatgagaaagttactggtatgtcc
tgtcaaaatgttatcattgattcaaatggggaagatgacagagatcaaacttcttttctt
ccatttcatgaagttgcattgccaaaaccagttcagtctcctgcattagaaatgattgga
tatcatgatcccaatgcttaccatggagaacatgcagatctaaaatttgaaacaagtctg
cttcctaaagataactcaaagaaagacaaaggtaattatgttggagtacatgtggaagaa
gataataaggaattggaaacaagtctgtctcctgaagataacacaaagaaagacaaaggt
gtttatgttggtgtaagtgaggaagaagataacaaggttgatactgaagatgacgggcta
gaagatgtttggagggagatggcaatggcaatggaaacttctaaagatgtttctgcagat
caaccacccgaagaagaggaaaatgacgctgactgtgatcattctttcattttaaaagac
gatcttggttatgtttgtcgcgtttgtggggttattgacagaggaattgaaaccatattt
gaattccaatacaaggttaaaaagagcacaagaacttatatgtctgaatcatggaatgcc
aaagaaaaagctgatatatttggagttaagattgctaaagatgatctctcagtaactgaa
atatcagcacatcctcaacatgcaaatcaaatgaaaccgcaccaagtcgaaggattcaat
tttcttgtcagcaacctggtgggagaccatcctgggggatgcattctggctcatgctcca
ggatctggaaagacattcatggttatcagtttcatacagagttttctagagaagtatccc
gatgcacgacctctcgtggtgcttcctaagggaatactatcaacttggaaaaaggagttt
ctgacatggcaagtggaagatgtaccgctttatgatttttacagtgtgaaggctgacagt
agatcacaacaattggaagtcttaaaacagtgggtggataacaagagtatccttttctta
ggataccaacagttttcgtccattatttgtgataactgtagtaacaatacatcaatatct
tgccaagatatattgcttaagaaaccatcaattctcattttagatgagggacacactcct
aggaacgagaatacggatacggtacagtccctcgcaaaagtacaaacaccaagaaaagtt
gttttgtccggaactttatatcaaaatcatgtcaaggaggtatttaacgtgcttaacctt
gtccgcccaaagtttataaagatggaaacgtctaaacctattgtccaacgcattaggagt
aggatccatttacctggtgtgaaagacttctgtgatttggttgaaaacactttgcagaag
gacccggattttaaaaggaaagtagctgttatacatgatttgcgggagatgaccagcaag
gtactgcactattataaaggcgattttcttgatgagcttcctggcttagttgattttact
gtggtgctcaatatgacacccagacagaagcatgaagttaagacaataaagagggtattt
agaaagttcaaggcttcttctgtaggtagtgctgtatacctgcacccagacttgaaacca
attgcagagaagtgtagtgaaaattctatatctgagcatacaatggatgatttaatagcg
aaccaagatgtgagagacggggtgaaattaaaattctttcgcaatatgctgaatctatgc
caatcagctggggagaagcttttggtattcagtcaatatctcttgcctctaaaatatttg
gaaaggttagctatgaaatggaagggctggagtcttggaaaagaaatttttgtaatttca
ggagaatcgtccactgaacaaagggagtgctccatggaaaaattcaacaattcacccgag
gccaaaatcttttttgggtcaatcaaagcatgtggtgagggtatatcattggttggagca
tcccgtgtcatcatcttagatgtgcacctcaacccgtctgttactcgtcaagctattggc
cgtgctttccgaccaggccagaaaaggaaagtgtttgtgtatcgattgatagctgctgat
tctccagaagaggaagatcacagtacttgtgtcaagaaggaattaatttcgaaaatgtgg
tttgaatggaatgaatattgtggtgacaaagcttttgaagttgagacagttgatgtgaag
gaatgtggtgatatgtttctagaaagtccattgttaggggaagatgtaaaagccctgtat
aaaaggtaa
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