Medicago truncatula (barrel medic): 25488205
Help
Entry
25488205 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25488205 isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25488205
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
25488205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_DCAF4
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_ACSF4
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_SPT8
WD40_Gbeta
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
25488205
NCBI-ProteinID:
XP_013463329
UniProt:
A0A072VGT0
LinkDB
All DBs
Position
2:complement(14989458..14997863)
Genome browser
AA seq
514 aa
AA seq
DB search
MPPARELPGFYFDPEKNRYFPIKGPIPGSSSSKTKIITPRPSQPSSSQLQEKNRSSCRKL
RNRTSKLLQIRELDGRHVNASHYCKCNFTEELRKIQTSQPAVWKYQGTNRIGISALEHLN
VDVQTAEGRFRTDVLLNGSINGSLSFSEVGRIGQNFDDGVKWMPDCVKSRIKGKTDEHNE
VPGPLFRPNGATLIMSSRISCIRLGPNVSPHAANDNPIVGNILFTTLGSETSGGSVYTIS
LVDPIDLGQGILNTWSRLEEITSFNSTLWTAEYDYIRHRAIIGTNQGGASVDLQSGTRSW
FLRCKSDVFAQQIVDSGNVILCGLRNGAVVSVDFREKRLLSSRLTEHRISYVSSNKKVGS
FKKDWFKLQGSIYPSHTIKMPSSISSLASLQFDDQYFLASSMDGSIRLYDRRMVQRGAVQ
SYEGHVNSHTQIQLGVDPYERYVMSGGEDCKLRIWSIKSGELLLEDKFSNSVLSTVCYQT
FNKFKAEEENQYTHDSSLGAWLGSHEGLFYMHWL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgccaccagcacgagagcttcctgggttctactttgacccagagaagaacaggtatttc
cccatcaaaggtcccattcctggctcttcttcttctaagaccaaaatcattactccaagg
ccttcccaaccctcttcctctcagttacaggaaaagaataggagttcttgcaggaagctt
agaaacagaacgtctaagctgctgcagattagggagttagatggtcgtcatgtcaatgcc
tcacactattgcaagtgtaacttcactgaggaactccggaaaatacaaacatctcagcct
gccgtttggaagtatcagggaaccaataggattggtattagtgctttggaacacttaaat
gttgatgtgcagacagcagagggtagatttcgaactgatgttttattgaatggcagcata
aatggctcgctgagtttttctgaagttggaaggattgggcaaaatttcgatgatggggta
aagtggatgcctgattgtgtgaagagtcgtattaaagggaaaacagatgagcataacgaa
gtcccagggccgcttttcagacctaatggagctacactgattatgtcctccagaatatct
tgtataagattgggtccaaatgtatcccctcatgctgcgaatgacaatccaattgttgga
aatatattatttactacgctgggatcagaaacatctggtggatctgtttataccatcagt
cttgttgatccaatagatcttggacaaggaatattgaacacatggagcagactagaggaa
ataacgtctttcaatagtaccctttggacagctgaatacgattatattagacatcgggct
ataattggtactaatcagggaggtgcttcggtggatcttcaaagtgggacaaggtcatgg
tttttacgttgtaaaagtgatgtttttgcacaacagattgttgattcaggaaatgtgatt
ttatgtggactcagaaatggggcagttgtctcggtagattttcgagagaaaagattgctt
tctagtagacttactgagcataggatatcatatgtatcttcaaataagaaagttggaagt
tttaaaaaagattggttcaagcttcaaggaagcatatatccttcacataccattaagatg
ccttcatctatatccagtttggcatcacttcaatttgatgatcagtacttcttggcaagc
tccatggatggatcgataaggctatacgaccgtcgcatggtccagaggggtgcggttcaa
tcttatgaagggcacgtgaattcccatactcaaatacagctcggtgttgacccatatgag
agatatgttatgtcaggtggagaggattgcaagctacggatatggagtatcaagtctggt
gaattgcttttggaggataagttctctaattcagttctctccactgtgtgctatcaaaca
tttaataagtttaaagcagaagaagaaaaccaatacacacatgactcttctttgggtgca
tggcttggatcacatgaaggactattctatatgcactggttatga
DBGET
integrated database retrieval system
