Medicago truncatula (barrel medic): 25488378
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Entry
25488378 CDS
T01716
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
25488378
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
25488378
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
25488378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
CMAS
Methyltransf_9
DUF2226
Motif
Other DBs
NCBI-GeneID:
25488378
NCBI-ProteinID:
XP_024632386
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All DBs
Position
2:complement(23887880..23890787)
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AA seq
334 aa
AA seq
DB search
MKQINTKSDESYITHNSSSAAASAPPAAASSISVKSTPEIEKKFVHHVYDAIAPHFSSTR
YAKWPKVAEFLQNLHPGSLILDAGCGNGKYLGFNQDCFFIGCDISPSLIKICLDRGNEVL
VADAVNLPYRTGFGDAAISIAVLHHLSTENRRRKAIEELVRVVKKGGLVLITVWAVEQED
EALVKKWTPLAEKYVEEWQGPGSPRATRVSSSLSLESIPESEESGLGGEEMKVCDKSEIS
GDLKEEKNVKNQQEYFVPWHLPYHRAEVSGASAHALATGLATKDDVKGAVVYNRYYHVFS
EGELESLTNGITNARVVDQFFDKSNWCIILEKTS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatcaacactaaatctgatgaatcttacatcacacacaattcatcatcagca
gcagcatcagcaccaccagctgcagcatcatctataagtgtgaaatccacccctgaaatt
gaaaaaaagtttgttcaccatgtttatgatgcaattgccccacattttagttcgacccgt
tatgcgaaatggccgaaagttgctgaatttctacaaaatttgcatccaggatcattgatc
ttggatgcaggatgtgggaatgggaagtatctcgggtttaatcaagattgtttttttata
ggatgtgatattagtccttcattgattaagatatgtttagatagaggaaatgaggttctt
gttgcagatgctgttaatcttccctatagaactggttttggtgatgctgctatatctatt
gctgtgttgcatcatttgagtaccgagaatagacggcgaaaagcgattgaagagttggtc
agggttgttaaaaagggtgggcttgttttgattactgtttgggctgttgagcaagaggat
gaagcgttggttaagaaatggactccgcttgctgagaagtatgttgaagagtggcaggga
ccgggaagtccacgtgctactcgggtgtcttcttcgttgtcgttggaaagtattccggaa
agtgaggagagtggtttgggtggtgaggagatgaaagtttgcgataagtctgaaatttca
ggagatttgaaggaagaaaagaatgtgaagaatcaacaggagtattttgttccttggcat
ttaccttatcatcgtgctgaagtcagtggcgcttctgctcatgctttggctactggtctt
gctactaaagatgacgtaaagggtgctgtagtgtataacagatattatcatgtttttagt
gaaggcgagcttgaaagcttgacaaatggaataaccaatgctagagttgttgatcagttt
tttgataaatccaactggtgtattattctagagaagacatcatga
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