Medicago truncatula (barrel medic): 25488483
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Entry
25488483 CDS
T01716
Name
(RefSeq) serrate RNA effector molecule
KO
K27103
serrate RNA effector molecule
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25488483
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
25488483
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
25488483
NCBI-ProteinID:
XP_013458794
UniProt:
A0A072UU14
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Position
3:complement(877285..884822)
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AA seq
704 aa
AA seq
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MAEVENLPPESHDRSPTITTAPPPPDDDLPPPPNPNPRRRDFDRRDDRDFDRRPHRGGRG
GRGGGGYYNNRDRDIKRRRSPSPNYRDRRYSPPPQQSRRSPPPYKRSRRGSPHRPNDRFG
HDHFGGYERGGGRGGYADDRPGGRFPHRSGGGYQNGISDLDANRGYADLPSGGARREGLM
SYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAYFNTHKDAEWLKDKYHPTNLLTVI
ERRNENARRLAKEFLLDLQSGTLDINPGLNSASTKSEQATEPNSEEETDAGGKRRRHGRG
SNKDNDFSAAPKAHPVSSEPRRIQEDIHQVQAVVRKLDKEKGIEDNILCTNDHSKNSDKA
RSGSVGPVVIIRGLTSIKGLEGVELLDTLITYLWRIHGVDYYGMLETSDAKGFRHVRPEG
ARHEETAKSGSEWEKKLDSFWQRRLDGLDPLEVRTAKEKIDAAAADMLDPYVRKIRDEKY
GWKYGCGAKSCTKLFHAVEFVYKHLKLKHPELVLELTSKLREDLYFQNYMNDPDAPGGTP
VMQQSQDKPLKRRLLEGRLKDDRGNRRDQDRSDRTNGDRPDSSPSHERQLGNRDETMFDA
YGGPAVSFNSDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMFRDQGPSSYDPSGMTMRSG
PHIGGQASMIAVPPTFRPDPRRMRSYQDLDAPEEEVTVIDYRSL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtcgaaaatctccctcccgaatcacacgaccgatctcccaccatcaccacc
gctccacctcctcccgacgacgatctcccacctccacctaatcccaaccctcgtcgtcgc
gatttcgaccgtcgtgacgacagagatttcgaccgccgtcctcaccgtggcggccgtggt
ggccgcggtggcggtggttactacaacaaccgtgatagagacatcaaacgccgtcgtagt
cctagccctaactatcgtgaccgccgctattctcctcctccgcaacagtctcgtcgttct
cctccgccgtataagagatctagaaggggtagtcctcatagacctaacgacaggtttggc
catgatcactttggtggctatgaacggggaggtggaaggggtggctatgcagatgataga
cctggtggcagatttccacatcgatctggagggggatatcaaaacggaatttctgatttg
gatgccaatcgcggttatgcagatttgccaagtgggggtgctcgaagagagggtttgatg
tcctataagcaattcatccaggagcttgaagatgatatactgccatctgaagctgagcgt
agataccaagagtacaagtcagagtatattactacccaaaaacgagcttatttcaatacc
cacaaggatgctgagtggttgaaagataagtatcatccaacaaatttacttacagtaatt
gaaaggaggaatgaaaatgctcgacgtttggcaaaggagtttttgcttgatttgcaaagt
ggaacactagacataaatccaggtttaaactctgcatccactaaatcagagcaagccact
gagcccaattcagaggaggaaacagatgccggtggtaaaagaagaagacatggcagggga
tctaataaggacaacgatttctctgctgctccgaaggctcaccctgtcagttctgaacct
agaaggatacaagaagatattcatcaggttcaggctgttgttcgtaagcttgacaaggaa
aaagggattgaagataatattttatgcaccaatgatcatagtaaaaatagtgacaaggct
cgcagtggatctgtgggccctgtagtaattatccgtggcttaacatctattaagggctta
gagggtgttgagctactggacacgcttataacatatctttggcggattcatggtgtagat
tattatggaatgcttgagactagtgatgccaaaggttttaggcatgtgagaccagaagga
gcaaggcatgaagaaacagctaagtcggggtcagaatgggagaaaaaacttgattcattt
tggcagagaaggttggacggcctggatcccttggaagtaaggactgcaaaggagaagata
gatgctgcagcagctgacatgttggatccatatgttagaaaaattagggatgaaaagtat
ggttggaagtatggctgtggagccaagagttgcacaaagctttttcatgctgttgagttt
gtgtacaaacatctcaagctaaaacacccagagcttgtgttggaactaacatcaaaattg
cgggaagatctttattttcaaaattacatgaatgatcctgatgctcctggtggaacgcct
gtcatgcagcaatctcaggacaaacctttaaagcgaaggttactggaaggccgattgaaa
gatgatcgtgggaatcggcgagaccaggataggagcgacagaacaaatggagatagacct
gacagttcgccatcccatgagaggcagttgggaaaccgtgatgaaacgatgttcgatgca
tatggtggacctgctgtatcattcaactcagatatgccccctcctccagttttgatgcct
gtacctggtgccgggcctctgggaccctttgttcctgctccaccagaagttgcgatgcag
atgtttagggatcaaggaccatcttcgtatgatccatcaggaatgacgatgcgttctggt
cctcacatagggggacaagcctctatgattgctgttcctcccacctttagacctgatccc
cgacggatgcggagttatcaagacttggatgccccagaagaagaagttactgtcatagac
tatcggagcttgtag
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